Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20] 166,448 sequences; 681,652,711 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq115624 91.5 1e-13 >seq115624 Length=278 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/225 (69%), Gaps = 20/225 (9%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| || ||||| || || ||| || ||||| ||||| ||||||||||||||||| Sbjct 58 AGACGCAAGACCAGGTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 117 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGG------------TCCGCG 41752 |||| || |||||||| || || || ||||| ||||| || || | Sbjct 118 CCGTCTTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGNNNNNNNNNNNNATCTGGA 177 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG-ACACAGTG---TCGCTCGA 41808 || | || ||| |||||| |||||| ||| |||| || || || || | Sbjct 178 GGGATGCCCTCTTTGTCCTGGATTTTAGCCTT----GACGTTTTCAATGGAATCACTGGG 233 Query 41809 CTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAA 41853 ||||||||||| || || || || || ||||| ||||| ||||| Sbjct 234 CTCCACCTCCAGGGTGATGGTCTTTCCAGTCAGGGTCTTCACGAA 278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461342130297600