Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20nigrocinctus_20[genbank_20GCA_5F000475235.2_202016-12-20] 15,872 sequences; 746,044,620 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1998 109 6e-19 >seq1998 Length=115458 Score = 109 bits (120), Expect = 6e-19 Identities = 124/164 (76%), Gaps = 8/164 (5%) Strand=Plus/Minus Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 |||| ||||||| ||||||||||||||||| || || ||||| |||||||| || ||| Sbjct 72329 GTACTCGGCCCCAAAGTGCCTCCACTGGAAACCATACACGGGTCCCAGGTCGCCTTCCTC 72270 Query 146100 CC----TGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGA 146155 | |||| ||||| | | | ||||||| ||||||||| ||||||||||| | Sbjct 72269 TCGATCTGTGA---AGCCCAGGTTGTCC-AGGAAGTTCCGGGACCCATTGGCGTCCCAAA 72214 Query 146156 TCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCC 146199 |||| || || |||| |||||||| |||| || || || ||| Sbjct 72213 TCTTCACCCCTTTCGCTGAGAGCTCCTTGGCGTTTGTTGATCCC 72170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589959728762880