Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20nigrocinctus_20[genbank_20GCA_5F000475235.2_202016-12-20] 15,872 sequences; 746,044,620 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq620 132 3e-26 >seq620 Length=195490 Score = 132 bits (146), Expect = 3e-26 Identities = 176/242 (73%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 91815 CCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA-CTGGAACAAAGTGGC 91873 ||||||| ||||||| ||| ||||||| ||||||| | | ||| || || | || | | Sbjct 163492 CCTGCAAGGAGGACTGCAAGATCATCACCGACACTG-CTGCCAAGCTCGAGCGCAGCGCC 163434 Query 91874 TTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCTGCGCAACTCGGCACTG 91933 ||||||||||| || |||| || ||||| || || || |||||||| || || | ||| Sbjct 163433 TTCTACTGGGGCCCCCTGGGAGTGGAGGACGCCCACCGCATGCTGCGGGACGCGCCGCTG 163374 Query 91934 GGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTGTTCACGCTGTCGTATCAC 91993 ||||||| ||||| || || || | || ||||||||||| |||||| |||| || ||| Sbjct 163373 GGCAGCTACCTCATCCGCGACAGTCGCCAGAAGGACGTCTTCTTCACGTTGTCCTACCAC 163314 Query 91994 TCTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAGGACAAGCAATTTTCCTTGGCT 92053 || ||| || || || || | || || |||||| | || | || || |||| Sbjct 163313 GGCAAGAGCGGGCCGGTGAGCGTTCGCATCGACTACAAGAAGCAGAAGTTCTCGCTGGCA 163254 Query 92054 GG 92055 || Sbjct 163253 GG 163252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356164690172416