Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20nigrocinctus_20[genbank_20GCA_5F000475235.2_202016-12-20] 15,872 sequences; 746,044,620 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq954 84.2 3e-11 >seq954 Length=166441 Score = 84.2 bits (92), Expect = 3e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489 ||||| || || || || |||||||||||||| || || || || |||||||||||| Sbjct 95940 GTGGCTTTTGCGGCAGTGGAGGGCATCTTCTTCTCCGGCTCATTCGCTGCCATCTTTTGG 95999 Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549 ||||||||| | ||||| ||||| || || || || |||||| | || ||| || Sbjct 96000 CTCAAGAAGAGAGGACTAATGCCTGGCCTTACCTACTCCAACGAGCTGATTAGTCGGGAT 96059 Query 125550 GAGG 125553 |||| Sbjct 96060 GAGG 96063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740912173854720