Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20nigrocinctus_20[genbank_20GCA_5F000475235.2_202016-12-20] 15,872 sequences; 746,044,620 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq1998 123 2e-23 >seq1998 Length=115458 Score = 123 bits (136), Expect = 2e-23 Identities = 136/179 (76%), Gaps = 9/179 (5%) Strand=Plus/Minus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||||| |||||||| || || || | |||||||||||| || ||||| ||||| ||||| Sbjct 72338 CATGTTTGTGTACTCGGCCCCAAAGTGCCTCCACTGGAAACCATACACGGGTCCCAGGTC 72279 Query 25833 TCCATCTTCCC----TGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGG 25888 || || || | |||| |||||| || |||| |||| | ||| ||||||| Sbjct 72278 GCCTTCCTCTCGATCTGTG----AAGCCCAGGTTGTCCAGGAAGTTCCGGGACCCATTGG 72223 Query 25889 CGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 25946 ||||||| ||||| ||||| ||| | |||||||| |||| |||||| || |||| |||| Sbjct 72222 CGTCCCAAATCTTCACCCCTTTCGCTGAGAGCTCCTTGGCGTTTGTTGATCCCTGTGAC 72164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340071803782656