Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20nigrocinctus_20[genbank_20GCA_5F000475235.2_202016-12-20] 15,872 sequences; 746,044,620 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq170 93.3 4e-14 >seq170 Length=344817 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||||| | ||||| || || | ||||| || | ||||| | || | || | Sbjct 171955 AACATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGCCC 171896 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 | ||||||||| ||| | || || ||||| ||||| ||||| || || || || Sbjct 171895 AGCGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGAC 171836 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || || || || | | ||||| || || ||||||| | | | | || |||||| Sbjct 171835 CAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCCGACTAC 171776 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| || |||||||| || ||||||| |||||| | || || || || Sbjct 171775 AACATCCAGAAAGAATCYACCCTCCATCTTGTCCTGCGTCTGAGGGGTGG 171726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478567433379840