Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20nigrocinctus_20[genbank_20GCA_5F000475235.2_202016-12-20] 15,872 sequences; 746,044,620 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq170 96.9 3e-15 >seq170 Length=344817 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || ||||| | ||||| || || | ||||| || | || || | || |||||| || Sbjct 171955 AACATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGCCC 171896 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 | ||||||||| ||| | || || ||||| ||||| |||||||| || || || Sbjct 171895 AGCGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGAC 171836 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || ||||| ||||| | | |||||||| || ||||||| | | | || ||| || Sbjct 171835 CAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCCGACTAC 171776 Query 24168 AACATTCAAAAAGAATCTAC 24187 ||||| || |||||||| || Sbjct 171775 AACATCCAGAAAGAATCYAC 171756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429852833180160