Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20nigrocinctus_20[genbank_20GCA_5F000475235.2_202016-12-20] 15,872 sequences; 746,044,620 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq844 95.1 1e-14 seq410 95.1 1e-14 >seq844 Length=176084 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 93331 GTCATGTTCGACAAGATCACTACCAGGGTGCGCAAACTTTGCGAGGGTCTGGACTCTGAC 93390 |||||||||||||| ||||| | | | || || ||| | || ||| |||||||| Sbjct 38472 GTCATGTTCGACAAAATCACCTGTCGCATCCAGAAGCTGTGCTACGGACTGAACTCTGAC 38531 Query 93391 TTCGTGGATCCCGTCGAGGTCACCATGAGAGTGAATCAGGGAATATATGCCGGGGTCACA 93450 ||||||||||| | | || ||||||||| |||| ||||| | || ||| ||||| Sbjct 38532 TTCGTGGATCCGGCCCAGATCACCATGAAGGTGATCCAGGGTTTGTACAGCGGCGTCACC 38591 Query 93451 ACTGTCGAGCTCGATCTTCTGGCCGCGGAGACTTGTGCCTTCATGAGTACGAATCACCCG 93510 || || |||||||| ||||| || |||| ||| | | || || ||||| Sbjct 38592 ACCGTGGAGCTCGACACGCTGGCTGCTGAGATCACCGCCACTCTCACAACTAAGCACCCC 38651 Query 93511 GACTACTCCATTTTGGCTGCTCGAATC 93537 |||||| |||| | ||||| || ||| Sbjct 38652 GACTACGCCATACTCGCTGCACGGATC 38678 >seq410 Length=233677 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 95077 CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATC 95136 || ||||||| ||| ||||| |||||||||||||||| || ||||| || |||||| Sbjct 230974 CATGGTGTGAGGAACAGTCTGCTCTTGGCCCCCATGCCCACAGCTTCCACCGCACAGATC 231033 Query 95137 CTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTC 95196 || |||||||||||||| | || | | |||| |||| | |||| | | |||||||| Sbjct 231034 CTGGGCAACAACGAGTCCATTGAGGCTTACACCAGCAACATCTACACCCGCAGGGTGCTC 231093 Query 95197 GCCGGGGAATTCCCCGTCATCA 95218 | || || || | |||| || Sbjct 231094 TCGGGAGAGTTTCAGGTCAGCA 231115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494625046917120