Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20nigrocinctus_20[genbank_20GCA_5F000475235.2_202016-12-20] 15,872 sequences; 746,044,620 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq410 107 3e-18 >seq410 Length=233677 Score = 107 bits (118), Expect = 3e-18 Identities = 114/148 (77%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 203914 CTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAAT 203973 || ||| || || | ||||||| | |||||||| ||| || ||||| ||||| || Sbjct 231990 CTTCCAACCATAGAAGTGCATGCTGGTCAGTTTGCCATAGTTTGGCTCGGCAATGTGGAT 231931 Query 203974 GTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATAATGG 204032 ||| ||||||||||| ||||||||| |||| || |||||||| ||||| |||| | | Sbjct 231930 GTTTAGAGACTGGCTCTGGTCGATG-TAGGCTCCACGATCTGCTGCCATCTTGAGTACAG 231872 Query 204033 TCTTCTGCGAAATCTCCCACACCGTCTT 204060 ||||||| || || |||||||| || || Sbjct 231871 TCTTCTGGGAGATTTCCCACACAGTTTT 231844 Score = 98.7 bits (108), Expect = 2e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 204189 TGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTT 204248 || ||| |||||| ||||| || ||||||| |||||| | | |||| ||||| | | | Sbjct 231115 TGCTGACCTGAAACTCTCCCGAGAGCACCCTGCGGGTGTAGATGTTGCTGGTGTAAGCCT 231056 Query 204249 CGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGA 204308 | | | |||||||||||| | ||||| |||||| || ||||||||||| |||| || Sbjct 231055 CAATGGACTCGTTGTTGCCCAGGATCTGTGCGGTGGAAGCTGTGGGCATGGGGGCCAAGA 230996 Query 204309 GCAGGGAGTTGCGCACACC 204327 |||| ||| | |||||| Sbjct 230995 GCAGACTGTTCCTCACACC 230977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794997441208320