Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20nigrocinctus_20[genbank_20GCA_5F000475235.2_202016-12-20] 15,872 sequences; 746,044,620 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq5248 89.7 9e-13 >seq5248 Length=42889 Score = 89.7 bits (98), Expect = 9e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 58377 GAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCA 58436 |||| | |||||||| | || ||||| || || || || | || || |||||||||| Sbjct 24677 GAGCTCTGTGGTGGTATTTCATCTCTAAGGGCATCGAGTATCTGGACACGGTGTTTTTCA 24736 Query 58437 TACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGT 58496 | || |||||||| || || || |||| ||| || ||||| || || || | | |||| Sbjct 24737 TCCTGAGGAAAAAATTCAACCAGGTTACCTTCCTGCACGTCTACCACCACTGCAGCATGT 24796 Query 58497 TTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540 | || | | ||| | || || |||||| | |||||||| ||| Sbjct 24797 TCACGCTCTGGTGGATCGGCATCAAATGGGTGGCAGGAGGACAG 24840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903231963217920