Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20nigrocinctus_20[genbank_20GCA_5F000475235.2_202016-12-20] 15,872 sequences; 746,044,620 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq410 98.7 1e-15 >seq410 Length=233677 Score = 98.7 bits (108), Expect = 1e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324 |||||| ||| ||||||||||| || || || || | ||| || || || || Sbjct 230158 CTCATCTTTACTTGTGTACTCTACGATCTCCGTGCACAGATTGCTGGATTTGATGGTGCC 230099 Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384 || ||||| ||||| |||||| ||||||| || || |||||||||||||| ||||| || Sbjct 230098 CAGATTCTGYTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTAGAGCATGTATGGCGTGCC 230039 Query 111385 CGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAAC 111420 || || ||||| |||| || || || | ||| || Sbjct 230038 GGTTTCGGTCTGCGATTCGATGATGGCGTACCACAC 230003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627907398451200