Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20nigrocinctus_20[genbank_20GCA_5F000475235.2_202016-12-20] 15,872 sequences; 746,044,620 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1998 131 2e-25 >seq1998 Length=115458 Score = 131 bits (144), Expect = 2e-25 Identities = 120/152 (79%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 34295 ACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGA 34354 || ||| ||||||||||||| | ||||||||||| |||||||| | ||||| || Sbjct 72177 ACAAACGCCAAGGAGCTCTCAGCGAAAGGGGTGAAGATTTGGGACGCCAATGGGTCCCGG 72236 Query 34355 GACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTAC 34414 |||| |||||||| | ||| ||| || ||| ||||| |||||| |||| || || || Sbjct 72237 AACTTCCTGGACAACCTGGGCTTCACAGATCGAGAGGAAGGCGACCTGGGACCCGTGTAT 72296 Query 34415 GGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 || ||||||||||| ||||||||||| ||||| Sbjct 72297 GGTTTCCAGTGGAGGCACTTTGGGGCCGAGTA 72328 Score = 131 bits (144), Expect = 2e-25 Identities = 120/152 (79%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 ||||| ||||||||||| ||||||||||| || || || || |||| |||||| ||||| Sbjct 72328 TACTCGGCCCCAAAGTGCCTCCACTGGAAACCATACACGGGTCCCAGGTCGCCTTCCTCT 72269 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 ||| || ||| ||| | |||||||| |||| || ||||| | |||||||| |||||| Sbjct 72268 CGATCTGTGAAGCCCAGGTTGTCCAGGAAGTTCCGGGACCCATTGGCGTCCCAAATCTTC 72209 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGT 7050 ||||| | ||||||||||||| ||| || Sbjct 72208 ACCCCTTTCGCTGAGAGCTCCTTGGCGTTTGT 72177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448173464739840