Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20rubrivinctus_20[genbank_20GCA_5F000475215.1_202013-10-22] 68,206 sequences; 756,296,653 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq17722 91.5 1e-13 >seq17722 Length=45798 Score = 91.5 bits (100), Expect = 1e-13 Identities = 119/162 (73%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGT-TGCAAACGGTGAATTATC 19030 |||| || || || || ||||| | |||||||| ||||| ||| | ||| || | || Sbjct 8061 ATGGCTCTGCCACCCTGCCACACCCTGTGTCAGTTCTACGTGTGCGA-CGGCGAGCTGTC 8119 Query 19031 CTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGG 19090 || || | |||||| | || || |||||||| || ||||| || ||||| || || | Sbjct 8120 GTGTCAGCTCTACCAGCGCTCTGGTGATATGGGTCTCGGGGTGCCTTTCAATATCGCCAG 8179 Query 19091 ATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACT 19132 ||||||||||| |||||||| | || || | |||||||| Sbjct 8180 CTATGCACTTCTCACCTACATGATCGCACACATCACAGGACT 8221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399171908055270