Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20rubrivinctus_20[genbank_20GCA_5F000475215.1_202013-10-22] 68,206 sequences; 756,296,653 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq17722 86.0 4e-12 >seq17722 Length=45798 Score = 86.0 bits (94), Expect = 4e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 |||| || |||||||| | || | || | |||||| || || || ||||||||||| Sbjct 8215 GTGATGTGTGCGATCATGTAGGTGAGAAGTGCATAGCTGGCGATATTGAAAGGCACCCCG 8156 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 || ||||||||| | || | || || | |||||| || |||| || || ||||| || Sbjct 8155 AGACCCATATCACCAGAGCGCTGGTAGAGCTGACACGACAGCTCGCCGTCGCACACGTAG 8096 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 ||||||| || || ||||| |||| ||||| Sbjct 8095 AACTGACACAGGGTGTGGCAGGGTGGCAGAGCCAT 8061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346495732115420