Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20rubrivinctus_20[genbank_20GCA_5F000475215.1_202013-10-22] 68,206 sequences; 756,296,653 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq15835 95.1 1e-14 >seq15835 Length=21870 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || || || || || ||||| || || ||||| ||| |||| ||| ||||| Sbjct 37 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAGC 96 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 |||||| ||| | || ||| || || || ||||||||| | ||| |||||| Sbjct 97 GACACTATTGAGAACGTGAAAGCCAAGATCCAGGACAAAGAAGGCATTCCCCCAGATCAG 156 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || || || | ||| ||||| || | ||||||| ||| | |||| || ||| Sbjct 157 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCCGACTACAAC 216 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || ||||| ||||| || | ||| | ||| || | || | ||||| Sbjct 217 ATCCAAAAGGAGTCCACCCTCCATCTTGTGCTGCGTCTGAGGGGAGG 263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424990428280720