Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20rubrivinctus_20[genbank_20GCA_5F000475215.1_202013-10-22] 68,206 sequences; 756,296,653 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq15835 113 4e-20 >seq15835 Length=21870 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || ||||||| |||| || ||| | Sbjct 37 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAGC 96 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||| ||| |||| || ||| ||||||||||| ||||| || || || Sbjct 97 GACACTATTGAGAACGTGAAAGCCAAGATCCAGGACAAAGAAGGCATTCCCCCAGATCAG 156 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||||||||| || | ||||||| |||||| | ||| ||||| Sbjct 157 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCCGACTACAAC 216 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| || ||||| || ||| | ||||| | || || ||||| Sbjct 217 ATCCAAAAGGAGTCCACCCTCCATCTTGTGCTGCGTCTGAGGGGAGG 263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432967791495890