Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20rubrivinctus_20[genbank_20GCA_5F000475215.1_202013-10-22] 68,206 sequences; 756,296,653 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq17722 86.0 6e-12 >seq17722 Length=45798 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/153 (73%), Gaps = 8/153 (5%) Strand=Plus/Minus Query 20527 GTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCC-C 20585 |||| | |||||||||||||||||||||||||| || || ||||||| || || ||| | Sbjct 6468 GTACTCGGCCCCAAAGTGCCTCCACTGGAAACCATACACGGGTCCCAGGTCGCCTTCCTC 6409 Query 20586 T---TCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATA 20642 | |||||| | ||| | | ||||||| | || ||| ||||| |||||| | Sbjct 6408 TCGATCTGTG----AAGCCCAGGTTGTCCAGGAAGTTCCGGGACCCATTGGCGTCCCAAA 6353 Query 20643 TCTTGACTCCTGTTCTTGAAAGCTCCCTGGAGT 20675 |||| || ||| | ||| |||||| ||| || Sbjct 6352 TCTTCACCCCTTTCGCTGAGAGCTCCTTGGCGT 6320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440996496585040