Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20rubrivinctus_20[genbank_20GCA_5F000475215.1_202013-10-22] 68,206 sequences; 756,296,653 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq25594 86.0 7e-12 >seq25594 Length=9440 Score = 86.0 bits (94), Expect = 7e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 18657 CATTACTCCCATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTC 18716 ||| ||||| | ||| ||||| || || |||| ||| |||||||| || ||||| ||||| Sbjct 2988 CATGACTCCAAATTTCTGATACTCCGCTACTCGTTTCTCAAAGAAGTTGGTTTTCCCCTC 3047 Query 18717 TAATGATATACATTCCATAAAATCAAATGGATTTT 18751 || ||| || | ||||| || ||||||||||||| Sbjct 3048 TAGTGAAATGGACTCCATGAAGTCAAATGGATTTT 3082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561629560089840