Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20rubrivinctus_20[genbank_20GCA_5F000475215.1_202013-10-22] 68,206 sequences; 756,296,653 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq27301 82.4 6e-11 >seq27301 Length=2015 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| || || || || | ||| | ||| || ||| ||| || || || ||||| || || Sbjct 1875 GCCTCCTCTGAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1816 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || |||| |||| |||||| || ||||| ||||| ||||| || || | || Sbjct 1815 GAGGGTGCGGCCGTCTTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCTGGAGG 1756 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | ||| ||||| || ||||| ||| ||| | | | || | |||||| Sbjct 1755 GATGCCTTCCTTATCCTGGATCTTGGCTTTGACATTTTCAATGGTGTCACTGGGCTCCAC 1696 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || || || || || |||| || || ||||| |||||||| Sbjct 1695 CTCCAAGGTGATGGTCTTCCCGGTCAGGGTCTTCACAAAGATCTGCAT 1648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380620941572538