Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20rubrivinctus_20[genbank_20GCA_5F000475215.1_202013-10-22] 68,206 sequences; 756,296,653 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq17313 136 4e-27 >seq17313 Length=17519 Score = 136 bits (150), Expect = 4e-27 Identities = 132/170 (78%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 ||||| ||||| || | ||||| ||| | ||| |||||||| ||| |||||| ||||| Sbjct 14969 AGCATCTGGGGCCCAACATGCGACGGCCTCGATCGCATTGTTGAGCAGTGTGACCTGCCT 15028 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 ||||| ||||||||||||||||| | ||||| |||||||| || |||| ||| | | Sbjct 15029 GAGCTGCAAGTGGGCGACTGGCTGGTCTTTGAGAACATGGGTGCCTACACGGTGGCCGCC 15088 Query 21245 TCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTC 21294 | || ||||| |||||||||| || ||| || | |||||||| || || Sbjct 15089 GCCTCTACCTTCAACGGCTTCCAAACGCCTGACATTCACTATGTCATGTC 15138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463150392610080