Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20rubrivinctus_20[genbank_20GCA_5F000475215.1_202013-10-22] 68,206 sequences; 756,296,653 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq46643 91.5 2e-13 seq28482 91.5 2e-13 seq23321 91.5 2e-13 seq17100 91.5 2e-13 seq14588 91.5 2e-13 seq13269 91.5 2e-13 seq10542 91.5 2e-13 seq36061 86.0 8e-12 >seq46643 Length=10405 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 4950 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 5009 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 5010 CCCCGACGGGGAG 5022 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 8804 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 8863 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 8864 CCCCGACGGGGAG 8876 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 4951 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 5010 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 5011 CCCGACGGGGAG 5022 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 8805 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 8864 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 8865 CCCGACGGGGAG 8876 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | |||| Sbjct 5024 AACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCAC 4965 Query 139411 TATACTAACGAGGA 139424 |||||||||||||| Sbjct 4964 TATACTAACGAGGA 4951 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | ||||| Sbjct 8877 ACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACT 8818 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 8817 ATACTAACGAGGA 8805 >seq28482 Length=3686 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 2023 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 2082 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 2083 CCCCGACGGGGAG 2095 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 2583 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 2642 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 2643 CCCCGACGGGGAG 2655 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 2024 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 2083 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 2084 CCCGACGGGGAG 2095 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 2584 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 2643 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 2644 CCCGACGGGGAG 2655 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | ||||| Sbjct 2096 ACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACT 2037 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 2036 ATACTAACGAGGA 2024 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | ||||| Sbjct 2656 ACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACT 2597 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 2596 ATACTAACGAGGA 2584 >seq23321 Length=21996 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 8366 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 8425 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 8426 CCCCGACGGGGAG 8438 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 8367 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 8426 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 8427 CCCGACGGGGAG 8438 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | |||| Sbjct 8440 AACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCAC 8381 Query 139411 TATACTAACGAGGA 139424 |||||||||||||| Sbjct 8380 TATACTAACGAGGA 8367 >seq17100 Length=3885 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 1529 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 1588 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 1589 CCCCGACGGGGAG 1601 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 2518 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 2577 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 2578 CCCCGACGGGGAG 2590 Score = 89.7 bits (98), Expect = 7e-13 Identities = 72/85 (85%), Gaps = 3/85 (4%) Strand=Plus/Plus Query 11717 TTGTGTAACCCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGAC 11775 || ||||||| |||||||||||||||||| ||||| ||| ||||| | ||| |||| Sbjct 1519 TTCTGTAACCT--TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGAC 1576 Query 11776 CGGGGTTCGATTCCCCGACGAGGAG 11800 |||||||||||||||||||| |||| Sbjct 1577 CGGGGTTCGATTCCCCGACGGGGAG 1601 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 2519 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 2578 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 2579 CCCGACGGGGAG 2590 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | |||| Sbjct 2592 AACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCAC 2533 Query 139411 TATACTAACGAGGA 139424 |||||||||||||| Sbjct 2532 TATACTAACGAGGA 2519 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | ||||| Sbjct 1602 ACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACT 1543 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 1542 ATACTAACGAGGA 1530 >seq14588 Length=47707 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 25261 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 25202 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 25201 CCCCGACGGGGAG 25189 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 25260 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 25201 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 25200 CCCGACGGGGAG 25189 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | |||| Sbjct 25187 AACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCAC 25246 Query 139411 TATACTAACGAGGA 139424 |||||||||||||| Sbjct 25247 TATACTAACGAGGA 25260 >seq13269 Length=32093 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 29790 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 29731 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 29730 CCCCGACGGGGAG 29718 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 29789 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 29730 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 29729 CCCGACGGGGAG 29718 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | ||||| Sbjct 29717 ACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACT 29776 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 29777 ATACTAACGAGGA 29789 >seq10542 Length=10943 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 343 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 402 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 403 CCCCGACGGGGAG 415 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 1136 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 1195 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 1196 CCCCGACGGGGAG 1208 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 3723 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 3782 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 3783 CCCCGACGGGGAG 3795 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 7160 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 7101 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 7100 CCCCGACGGGGAG 7088 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 9541 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 9482 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 9481 CCCCGACGGGGAG 9469 Score = 87.8 bits (96), Expect = 2e-12 Identities = 85/106 (80%), Gaps = 4/106 (4%) Strand=Plus/Minus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | |||| Sbjct 1210 AACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCAC 1151 Query 139411 TATACTAACGAGGATTTTGGTACACGC-TGAAT--GCAtttttttG 139453 |||||||||||||| || || || | ||||| ||||||| ||| Sbjct 1150 TATACTAACGAGGAAGGTGCTA-ACTCTTGAATTAGCATTTTATTG 1106 Score = 86.0 bits (94), Expect = 8e-12 Identities = 84/105 (80%), Gaps = 4/105 (4%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | ||||| Sbjct 416 ACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACT 357 Query 139412 ATACTAACGAGGATTTTGGTACACGC-TGAAT--GCAtttttttG 139453 ||||||||||||| || || || | ||||| ||||||| ||| Sbjct 356 ATACTAACGAGGAAGGTGCTA-ACTCTTGAATTAGCATTTTATTG 313 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 344 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 403 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 404 CCCGACGGGGAG 415 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 1137 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 1196 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 1197 CCCGACGGGGAG 1208 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 3724 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 3783 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 3784 CCCGACGGGGAG 3795 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 7159 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 7100 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 7099 CCCGACGGGGAG 7088 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 9540 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 9481 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 9480 CCCGACGGGGAG 9469 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | |||| Sbjct 7086 AACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCAC 7145 Query 139411 TATACTAACGAGGA 139424 |||||||||||||| Sbjct 7146 TATACTAACGAGGA 7159 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | | |||||||||||||||| Sbjct 2614 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGTGAAAGACCGGGGTTCGATT 2673 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 2674 CCCCGACGGGGAG 2686 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | ||||| Sbjct 3796 ACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACT 3737 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 3736 ATACTAACGAGGA 3724 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | ||||| Sbjct 9468 ACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACT 9527 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 9528 ATACTAACGAGGA 9540 >seq36061 Length=41405 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| |||||| | | || || | ||||||||||||||||||||| Sbjct 19956 TCCTCGTTAGTATAGTGGTGAGTATTTC-GCCTTTCACGCGGGAGACCGGGGTTCGATTC 20014 Query 8718 CCCGACGAGGAG 8729 || |||| |||| Sbjct 20015 CCTGACGGGGAG 20026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652288200844640