Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20steindachneri_20[genbank_20GCA_5F001910785.1_202016-12- 20] 279,232 sequences; 648,011,071 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq247423 161 1e-34 >seq247423 Length=3941 Score = 161 bits (178), Expect = 1e-34 Identities = 142/177 (80%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 145749 GAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGG 145808 ||| || |||| ||| |||| ||||||||| || || | |||||||| || ||||| || Sbjct 2490 GAGTCCTGTGATGTGTGCGATCATGTAGGTGAGAAGTGCATAGCTGGCGATATTGAAAGG 2431 Query 145809 CACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGC 145868 |||||| || ||||| || || ||||||||||| ||||| || || ||||| ||| | Sbjct 2430 CACCCCGAGACCCATATCACCAGAGCGCTGGTAGAGCTGACACGACAGCTCGCCGTCGCA 2371 Query 145869 CACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925 |||||||||||| |||||| ||||||||| ||||| |||||| ||||||||| || Sbjct 2370 CACGTAGAACTGACACAGGGTGTGGCAGGGTGGCAGAGCCATGAGGGGCAGGTCTGC 2314 Score = 109 bits (120), Expect = 6e-19 Identities = 124/164 (76%), Gaps = 8/164 (5%) Strand=Plus/Minus Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 |||| ||||||| ||||||||||||||||| || || ||||| |||||||| || ||| Sbjct 480 GTACTCGGCCCCAAAGTGCCTCCACTGGAAACCATACACGGGTCCCAGGTCGCCTTCCTC 421 Query 146100 CC----TGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGA 146155 | |||| ||||| | | | ||||||| ||||||||| ||||||||||| | Sbjct 420 TCGATCTGTGA---AGCCCAGGTTGTCC-AGGAAGTTCCGGGACCCATTGGCGTCCCAAA 365 Query 146156 TCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCC 146199 |||| || || |||| |||||||| |||| || || || ||| Sbjct 364 TCTTCACCCCTTTCGCTGAGAGCTCCTTGGCGTTTGTTGATCCC 321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588017195937280