Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20steindachneri_20[genbank_20GCA_5F001910785.1_202016-12- 20] 279,232 sequences; 648,011,071 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq226653 116 4e-21 >seq226653 Length=3613 Score = 116 bits (128), Expect = 4e-21 Identities = 184/257 (72%), Gaps = 10/257 (4%) Strand=Plus/Plus Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202 |||||||||||||||||||| ||||||||| | ||| || || ||||| || | || Sbjct 564 GAACTTCTCGAAGTTCCAGGACACGTCGTTCCTGCAGACCGGGCTCCAGGTGATTAACTT 623 Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGT--AGG 83260 |||||| ||| ||| | | ||||||||| || |||| || |||| | ||| Sbjct 624 GGGGTCAGTCATGAGGGCGGATGGGTCGTCGCTGGGGAATGGCA--GCTTCTCCTTCAGG 681 Query 83261 AAGGCGAAGAGCGGAT--GTGCCCTTGCACCGTTGACCTCGCAC-TTCTCGAAGAGCATA 83317 || | || || |||| || |||| ||||| ||||| ||| ||||| | ||| | Sbjct 682 AACACAAACAGGGGATGGGTATCCTT--CCCGTTCACCTC-CACTTTCTCCAGCAGCTGA 738 Query 83318 AAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCA 83377 || || ||||| ||||||| |||||||||| || ||||||||| | ||| || || Sbjct 739 AACTTTGGCTCATAGCCGTTTCCAGGACGGATGTACTTCAGGGATATGAGGATTTCCTCA 798 Query 83378 TTCTGGGCGTTTTCCTG 83394 |||| | ||| ||||| Sbjct 799 TTCTTGCAGTTCTCCTG 815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 606671855649280