Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20steindachneri_20[genbank_20GCA_5F001910785.1_202016-12- 20] 279,232 sequences; 648,011,071 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq247872 86.0 6e-12 seq155041 82.4 8e-11 >seq247872 Length=400 Score = 86.0 bits (94), Expect = 6e-12 Identities = 72/87 (83%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 116724 TGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACG 116783 |||| ||| ||||| | |||||| |||||| |||| || |||||||||||||||| Sbjct 205 TGAAGGACGACGAGAGGTTCTTCATCTCTCACGTGTTGGCGTTCTTCGCCGCCAGCGACG 146 Query 116784 GCATCGTCAACGAGAATCTGGTCGAGC 116810 |||||||||||||||| ||||| |||| Sbjct 145 GCATCGTCAACGAGAACCTGGT-GAGC 120 >seq155041 Length=2473 Score = 82.4 bits (90), Expect = 8e-11 Identities = 71/87 (82%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 116724 TGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACG 116783 |||| ||| ||||| | |||||| |||||| |||| || || ||||||||||||| Sbjct 1672 TGAAGGACGACGAGAGGTTCTTCATCTCTCACGTGTTGGCGTTCTTTGCCGCCAGCGACG 1613 Query 116784 GCATCGTCAACGAGAATCTGGTCGAGC 116810 |||||||||||||||| ||||| |||| Sbjct 1612 GCATCGTCAACGAGAACCTGGT-GAGC 1587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 513420878904320