Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20steindachneri_20[genbank_20GCA_5F001910785.1_202016-12- 20] 279,232 sequences; 648,011,071 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq211658 96.9 2e-15 >seq211658 Length=398 Score = 96.9 bits (106), Expect = 2e-15 Identities = 124/170 (73%), Gaps = 6/170 (4%) Strand=Plus/Plus Query 107856 ATTATTTCCTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCC 107915 |||| ||| ||||| || ||||| || || ||||| | ||| | ||||| |||||| Sbjct 3 ATTACTTCTTGCTTTCCTAATGTGTTTATAGCCAGCAGGTTAGAAAGAGTGGTATATGCC 62 Query 107916 TCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCA--- 107972 || ||||| | || || || ||| |||| || ||| || || |||| || |||| Sbjct 63 TCATGGTCGCGTGTTCAGGCAGACTTGAATTGCATGAAAAAC---CTCCTGAACTCACAC 119 Query 107973 GTGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTTCCCCATAAA 108022 || | |||| |||| | || || || |||||||||||||||||||| || Sbjct 120 GTCCAGTGGAGGTACCTGCTAAACACCTGCGGGACAGACTTCCCCATCAA 169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347083592515968