Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20steindachneri_20[genbank_20GCA_5F001910785.1_202016-12- 20] 279,232 sequences; 648,011,071 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq95031 150 4e-31 >seq95031 Length=3790 Score = 150 bits (166), Expect = 4e-31 Identities = 405/612 (66%), Gaps = 13/612 (2%) Strand=Plus/Plus Query 248802 CGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCT 248861 || || |||||| ||| | ||||| | ||||| || |||||| || || || | Sbjct 1093 CGACAGAGATTTCTCCTACAACTTCTTCGGCTTCAAGACTCTGGAGCGGTCCTACCTGTT 1152 Query 248862 CAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGG 248921 || || | ||||| | | || ||| ||||||||| | ||| ||||| | ||||| Sbjct 1153 GAAGATCAACGGCAAAGTGGCCGAGCGACCGCAGCACATGCTCATGAGAGTGTCCGTCGG 1212 Query 248922 GATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATG--AGTGAACGC 248979 ||| |||||| ||||| || | | |||||||||| | || || ||| Sbjct 1213 GATCCACAAGATGGACATCGACGCAGCCATTGAGACGTACAACCTGCTGTCAGAGAAG-- 1270 Query 248980 TGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGC 249039 ||| | || || ||| | || |||||||||||||| || ||| || |||||| | Sbjct 1271 TGGTTCACCCACGCCTCCCCCACGCTCTTCAACGCAGGAACCAACAGGCCACAGCTGTCC 1330 Query 249040 TCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAA 249099 ||||| || || |||||| |||||||| |||| |||||||| |||||||| || Sbjct 1331 AGCTGCTTCCTGCTCGCCATGAAAGACGACAGCATCGAAGGCATTTACGACACGCTGAAG 1390 Query 249100 CAGACGGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGA 249159 || || || || |||| || || ||||| ||| | | | | |||| || Sbjct 1391 CAATGCGCCCTCATCTCCAAATCAGCCGGGGGAATTGGTGTGGCGATAAGCTGCATCAGA 1450 Query 249160 GCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTT 249219 | | ||| |||||| || || || || | | || |||| ||| | || Sbjct 1451 ACAACGGGGAGCTACATCGCCGGCACCAACGGCAACTCCAACGGGGTCGTCCCCATGCT- 1509 Query 249220 CGATGCTTTGAGTCCAC-CGCCAGGTT-CATCAACCAGGCCGGGCGCCGAAAG----GGG 249273 || ||| | || || || ||| | || |||||| | ||| | | || || Sbjct 1510 -GAGAGTTTACAACAACACGGCACGTTACGTCGACCAGGGC-GGCAACAAGAGACCAGGA 1567 Query 249274 TCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAA 249333 | ||||||||||| |||| ||||||||||| | || || |||||||| | || Sbjct 1568 GCCTTCGCCATGTACCTGGAGCCCTGGCACGCCGACGTGTTTGACTTCCTGGAGCTAAAG 1627 Query 249334 AAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCC 249393 ||||||| ||| || ||| |||||| | ||||| ||||||||||||||| || || Sbjct 1628 AAGAACACCGGAAAGGAGGAGCAGAGAGCCAGGGACCTTTTCTACGGCCTGTGGATCCCC 1687 Query 249394 GACTTGTTCATG 249405 ||| |||||||| Sbjct 1688 GACCTGTTCATG 1699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1069924828901376