Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20steindachneri_20[genbank_20GCA_5F001910785.1_202016-12- 20] 279,232 sequences; 648,011,071 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq18280 123 2e-23 >seq18280 Length=14692 Score = 123 bits (136), Expect = 2e-23 Identities = 174/242 (72%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 91815 CCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA-CTGGAACAAAGTGGC 91873 ||||||| ||||||| ||| ||||||| ||||| | | | ||| || || | || | | Sbjct 545 CCTGCAAGGAGGACTGCAAGATCATCACCGACACCG-CTGCCAAGCTCGAGCGCAGCGCC 603 Query 91874 TTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCTGCGCAACTCGGCACTG 91933 ||||||||||| || |||| || ||||| || || || |||||||| || | | ||| Sbjct 604 TTCTACTGGGGCCCCCTGGGAGTGGAGGACGCCCACCGCATGCTGCGGGACGCACCGCTG 663 Query 91934 GGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTGTTCACGCTGTCGTATCAC 91993 ||||||| ||||| || || || | || ||||||||||| |||||| |||| || ||| Sbjct 664 GGCAGCTACCTCATCCGCGACAGTCGCCAGAAGGACGTCTTCTTCACGTTGTCCTACCAC 723 Query 91994 TCTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAGGACAAGCAATTTTCCTTGGCT 92053 || ||| || || || || | || || |||||| | || | || || |||| Sbjct 724 GGCAAGAGCGGGCCGGTGAGCGTTCGCATCGACTACAAGAAGCAGAAGTTCTCGCTGGCA 783 Query 92054 GG 92055 || Sbjct 784 GG 785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355021287186496