Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20steindachneri_20[genbank_20GCA_5F001910785.1_202016-12- 20] 279,232 sequences; 648,011,071 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq95031 127 3e-24 >seq95031 Length=3790 Score = 127 bits (140), Expect = 3e-24 Identities = 347/528 (66%), Gaps = 24/528 (5%) Strand=Plus/Plus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866 || ||||||||| ||| || | || || ||||| ||| | ||||| | | |||| Sbjct 1475 ACCAACGGCAACTCCAACGGGGTCGTCCCCATGCTGAGAGTTTACAACAACACGGCACGT 1534 Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 ||||| ||||||||||| || | ||||| || | ||| | ||| |||| || ||| Sbjct 1535 TACGTCGACCAGGGCGGCAACAAGAGACCAGGAGCCTTCGCCATGTACCTGGAGCCCTGG 1594 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 ||||| ||||| |||||||| | ||| | || ||| | || || ||| || Sbjct 1595 CACGCCGACGTGTTTGACTTCCTGGAGCTAAAGAAGAACACCGGAAAGGAGGAGCAGAGA 1654 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT------C 97040 ||||||||| | || || | || ||| | || || ||||||||||| | || | Sbjct 1655 GCCAGGGACCTTTTCTACGGCCTGTGGATCCCCGACCTGTTCATGAAGAGAGTGGAGAGC 1714 Query 97041 AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGC 97100 ||||| | ||||| || ||||| ||| || || || || || ||| ||| Sbjct 1715 AACGAGG------ACTGGTCTCTGATGTGTCCCAACGAGTGCCCAGGGTTGGACGAGTGC 1768 Query 97101 TGGGGCGAAGAGTTTGAGGCCAAG---TACACGGCCTACGAGCAAGAGGGCCGATACGTG 97157 ||||| || ||||| || ||| ||||| |||| ||| | |||| || | | Sbjct 1769 TGGGGGGAGGAGTTCGA---AAAGCTCTACACCTCCTATGAGAAGCAGGG--GA-AGTTC 1822 Query 97158 AGACGAGTCG---ATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACT 97214 | || || | | || | | ||||| | ||| | | | | ||| ||| ||| Sbjct 1823 AAGCGCGTGGTGAAGGCTCAGCAGTTGTGGCACGCCGTTATCGAGTCCCAGACAGAAACT 1882 Query 97215 GGAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTG 97274 || || || ||||| || ||||| || || || | || |||||||||| | || Sbjct 1883 GGTACGCCATACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAACAGAATCTG 1942 Query 97275 GGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCC 97322 |||||||||||| | ||| || ||||| ||||| | |||||| || Sbjct 1943 GGCACCATCAAGTCCAGCAACCTCTGCACAGAAATCATCGAGTACACC 1990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 738472606968320