Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20steindachneri_20[genbank_20GCA_5F001910785.1_202016-12- 20] 279,232 sequences; 648,011,071 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq95031 172 5e-38 >seq95031 Length=3790 Score = 172 bits (190), Expect = 5e-38 Identities = 905/1428 (63%), Gaps = 44/1428 (3%) Strand=Plus/Minus Query 153075 TTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTC 153134 ||||| ||| | | ||| | ||| ||||| ||||| || || || || |||| || || Sbjct 2550 TTGCTGGTGTAGGCTTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTG 2491 Query 153135 GGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGA-ATGTCGTCCTTCAA 153193 ||||| |||| || || |||| || |||||| | | | || | ||||||| Sbjct 2490 GGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTG-GATGGCGATCTTCTCCTTCAG 2432 Query 153194 CGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCC 153253 | || ||| ||| ||| | | || || | ||||||||||||||| | | || Sbjct 2431 CAGCTTCCAGTCCAGCAGTTCGGTGGGCTTCTTCTCCCACATGTCGTACTGCAGGATGCC 2372 Query 153254 TCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTG-GGCCAGTTCGC 153312 ||| ||||| ||| || |||| |||| |||| || | |||||| |||| Sbjct 2371 CTTGCTGACGGGAGAGCCTGCGTACGTCTCGTAGGGGCCGA-GCTCGGCGGCCAGCTCGC 2313 Query 153313 AGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCG 153372 |||| ||||| || ||| | | ||| |||| ||| |||||| |||| || | | Sbjct 2312 AGCTCGCCTCCAGGGCGGCGTGGTAGATGGCCTCGAAGATTTGAATATTCAGCAGCTGAG 2253 Query 153373 CTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATAC 153432 | |||| ||| ||| |||| |||| || | ||||| || |||| ||| |||| | Sbjct 2252 CCTCTTTGCTTTCGAACGGGTAACGCATGAGGATGAAGGCATCCGCCAAACCTTGGACGC 2193 Query 153433 CGACGCCGATGGGTCGATGCTTCTCGTTGC-----TGCGCCTCGCGCTCGCTATGGGATA 153487 | | || || || | || || |||| | ||| ||| || | ||||| Sbjct 2192 CAATTCCAATCGGCCTGTGGCGCTTGTTGGACTTTTCCGCTTCGGGCACT-----GGATA 2138 Query 153488 GTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAG 153547 || || ||||| || ||||| | || || | ||||| || | | || Sbjct 2137 GTAGTTAATTTCGATGATCTTGTTCAAATTCTTGACGATTACTTTGGTCACAGATGCCAG 2078 Query 153548 TTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATTCACGGCAATAGACGC 153607 ||| | || ||| | ||| || || | | ||| | || | ||||| || || Sbjct 2077 TTTTTTAAAGTCAAAAGTCCGCTC--CGGGGTG-ACGTACATGTTGAGCGCAATTGAGGC 2021 Query 153608 CAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTT 153667 ||||||||| || || ||| ||| | | |||||| | ||| || | ||||||||| Sbjct 2020 CAGATTACACACCGCTACCTCATCGTGGCTGGTGTACTCGATGATTTCTGTGCAGAGGTT 1961 Query 153668 GCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAA 153727 |||| | || ||| ||||| ||| || || ||||| || | ||||| ||||||||| | Sbjct 1960 GCTGGACTTGATGGTGCCCAGATTCTGTTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTA 1901 Query 153728 GAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTATG---CAGGTC 153784 |||||||| || || || || || | | |||||| || || | Sbjct 1900 CAGCATGTATGGCGTACCAGTTTCTGTCTGGGACT---CGATAACGGCGTGCCACAACTG 1844 Query 153785 CTGCGCTCGCACC-CGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCT 153843 ||| || |||| ||| || | |||| |||| || ||| || | Sbjct 1843 CTGAGCCTTCACCACGC-GCTTGAACTTCCCCTGCTTCTCATAGGAGGTGTAGAGCTTTT 1785 Query 153844 CAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACC 153903 | ||||| || || |||| ||| | | || || |||| | ||||||||||| |||| Sbjct 1784 CGAACTCCTCCCCCCAGCACTCGTCCAACCCTGGGCACTCGTTGGGACACATCAGAGACC 1725 Query 153904 ACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGA 153963 | |||| | | || | ||||||||| || || | ||| || |||| | | Sbjct 1724 AGTCCTCGTTGCTCTCCACTCTCTTCATGAACAGGTCGGGGATCCACAGGCCGTAGAAAA 1665 Query 153964 GGTCGC--GCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAGCACGCTATA 154021 |||| | || | ||| |||||| || |||| || || | || | | | | Sbjct 1664 GGTCCCTGGCTCTCTGC--TCCTCCTTTCCGGTGTTCTTCTTTAGCTCCAGGAAGTCAAA 1607 Query 154022 GATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCC 154078 | ||||||||||||||| || | ||| | ||| | ||| ||| | | || ||||| Sbjct 1606 CACGTCGGCGTGCCAGGGCTCCAGGTACATGGCGAAGGCTCCTGGTCTCTTGTTGCCGCC 1547 Query 154079 CTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGC 154138 ||| ||||||| || || | |||||| | || | || |||||| | | ||| | | Sbjct 1546 CTGGTCGACGTAACGTGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGACCCCGTTGGA 1487 Query 154139 GGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTA----- 154193 | |||||||||| ||| | ||| || || ||||||| ||| Sbjct 1486 GTTGCCGTTGGTGCCGGCGATGTAGCTCCC-----CGTTGTTCTGATGCAGCTTATCGCC 1432 Query 154194 ACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATG 154253 || ||||| || ||| | | || || ||| ||||| | |||||| ||| ||| Sbjct 1431 ACACCAATTCCCCCGGCTGATTTGGAGATGAGGGCGCATTGCTTCAGCGTGTCGTAAATG 1372 Query 154254 CCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGC 154313 || |||||||| ||||| | | |||||| ||| || ||| || || || Sbjct 1371 CCTTCGATGCTGTCGTCTTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTG 1312 Query 154314 GTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGG 154373 ||||| || ||||| ||||| ||||| || ||| || | || || | | Sbjct 1311 GTTCCTGCGTTGAAGAGCGTGGGGGAGGCGTGGGTGAACCACTTCTCTGACAGCAGGTTG 1252 Query 154374 TACGTTTCGATGGCGTCTTCGATAT-CATCGCCGTGAATGCCGAGCGCGACGCGCATGAG 154432 ||||| || ||||| | ||||| | |||| ||| || |||| | || | |||||| Sbjct 1251 TACGTCTCAATGGCTGCGTCGATGTCCATC-TTGTGGATCCCGACGGACACTCTCATGAG 1193 Query 154433 CATGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATA 154480 |||||||||||| || ||||| ||| | || |||||||| || || Sbjct 1192 CATGTGCTGCGGTCGCTCGGCCACTTTGCCGTTGATCTTCAACAGGTA 1145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494530245719040