Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20steindachneri_20[genbank_20GCA_5F001910785.1_202016-12- 20] 279,232 sequences; 648,011,071 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq95031 143 3e-29 >seq95031 Length=3790 Score = 143 bits (158), Expect = 3e-29 Identities = 645/1004 (64%), Gaps = 25/1004 (2%) Strand=Plus/Plus Query 112089 GATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGC 112148 || || |||| || || ||||| || || || |||||||||||||| ||| | | Sbjct 1661 GACCTTTTCTACGGCCTGTGGATCCCCGACCTGTTCATGAAGAGAGTGGAGAGCAACGAG 1720 Query 112149 AATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA-TGCCGTGGGTGAGGA 112207 | |||||||| | ||||| || || || || | ||| ||| | ||| ||||| Sbjct 1721 GACTGGTCTCTGATGTGTCCCAACGAGTGCCCAGGGTTGGACGAGTGCTGGGGG-GAGGA 1779 Query 112208 GTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGG--CGACTGCGACGGTGCCA 112265 ||| ||| |||||||| || ||| ||| | | | | | ||| |||| Sbjct 1780 GTTCGAAAAGCTCTACACCTCCTATGAG-AAGCAGGGGAAGTTCAAGCGCGT-GGTGAAG 1837 Query 112266 GCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATG 112325 ||| | ||||| | || || || |||| || || || |||||||| ||||| ||| Sbjct 1838 GCTCAGCAGTTGTGGCACGCCGTTATCGAGTCCCAGACAGAAACTGGTACGCCATACATG 1897 Query 112326 CTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGT 112385 || |||||||||||||| ||| ||||| || ||| ||||| |||| |||||| Sbjct 1898 CTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAACAGAATCTGGGCACCATCAAGTCC 1957 Query 112386 TCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAAC 112445 ||||||||| ||||||||| | || | || | | |||||| || |||||||| Sbjct 1958 AGCAACCTCTGCACAGAAATCATCGAGTACACCAGCCACGATGAGGTAGCGGTGTGTAAT 2017 Query 112446 CTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAA 112505 || || ||||| || ||| || ||| || || ||| ||| ||||| | | || Sbjct 2018 CTGGCCTCAATTGCGCTCAACATGTACGTCACCCCGGAG---CGGACTTTTGACTTTAAA 2074 Query 112506 AAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAAT 112565 ||||| || || ||| || || || | |||| | || || | || Sbjct 2075 AAACTGGCATCTGTGACCAAAGTAATCGTCAAGAATTTGAACAAGATCATCGAAATTAAC 2134 Query 112566 TTTTACCCCGTTGAGACTG-CTCGTAAA--TCTAATATGAGACACCGTCCAATTGGTCTC 112622 | || || || | | | || ||| || || | | | ||| | || ||||| | Sbjct 2135 TACTATCCAGT---GCCCGAAGCGGAAAAGTCCAACAAGCGCCACAGGCCGATTGGAATT 2191 Query 112623 GGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAA 112682 || ||||||||| | ||||||| ||||| || || || | || || | | || Sbjct 2192 GGCGTCCAAGGTTTGGCGGATGCCTTCATCCTCATGCGTTACCCGTTCGAAAGCAAAGAG 2251 Query 112683 GCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGT 112742 || || | ||| | || || ||| | || || |||||||| || |||||||| Sbjct 2252 GCTCAGCTGCTGAATATTCAAATCTTCGAGGCCATCTACCACGCCGCCCTGGAGGCGAGC 2311 Query 112743 TCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA-CA 112801 | ||| |||| | | || || || || || | | || ||||| | ||| || Sbjct 2312 TGCGAGCTGGCCGCCGAGCTCGGCCCCTACGAGACGTACGCAGGCTCTCC--CGTCAGCA 2369 Query 112802 AGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTAC--GACTGGGA 112858 |||| | || || | || |||||||| || ||| | ||| | |||| ||| Sbjct 2370 AGGGCATCCTGCAGTACGACATGTGGGAGAAGAAGCCCA--CCGAACTGCTGGACT-GGA 2426 Query 112859 CGCT-CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAA 112917 ||| || ||||| ||| | || | | ||||| || || |||| || | Sbjct 2427 AGCTGCTGAAGGAGAAGATCGCCATCCACGGCGTGAGGAACAGCCTGCTGCTGGCCCCGA 2486 Query 112918 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGA 112977 |||| || ||||||||||| || ||| |||| || || || | | | ||| ||||||| | Sbjct 2487 TGCCCACGGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCGAAGCCTACACCA 2546 Query 112978 CGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCG 113037 |||||||| | || |||| | ||||||||| ||| |||||| ||||| Sbjct 2547 GCAACATCTACACCCGCAGGGTCCTCTCCGGAGAGTTTCAGATCGTCAACCCTCATCTGC 2606 Query 113038 TGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 113081 | | ||||| | |||| || || ||| | |||| |||||| Sbjct 2607 TCAAAGACCTGACGGAGAGAGGGCTGTGGAGCGAGGAGATGAAG 2650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618575760727040