Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20steindachneri_20[genbank_20GCA_5F001910785.1_202016-12- 20] 279,232 sequences; 648,011,071 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq273973 91.5 3e-13 seq148584 86.0 1e-11 >seq273973 Length=5851 Score = 91.5 bits (100), Expect = 3e-13 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 60147 GAGCATTATGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGTGTTTTTCA 60206 |||| | |||||||||| || ||||| || || || || | || ||||||||||||| Sbjct 1210 GAGCTCTGTGGTGGTACTTCATCTCTAAGGGCATCGAGTATCTGGACACGGTGTTTTTCA 1269 Query 60207 TACTTAGGAAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTTTACTATGT 60266 | || |||||||| || || ||||||| || | ||||| || || || | | |||| Sbjct 1270 TCCTGAGGAAAAAATTCAACCAGGTTACCTTCCTGCACGTCTACCACCACTGCAGCATGT 1329 Query 60267 TTACTTTAGGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCA 60309 | || | | ||| | ||||| |||||| | || ||||| || Sbjct 1330 TCACGCTCTGGTGGATCGGCATCAAATGGGTGGCAGGAGGACA 1372 >seq148584 Length=286 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 82665 TGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATC 82724 || |||||||||||||| || | || || |||||||| || || || || || || || Sbjct 137 TGCTTTCCAGCAAAGATCAGACGCTGCTGGTCTGGAGGGATGCCCTCTTTGTCCTGGATT 78 Query 82725 TTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCT 82784 || || || || |||||||| | |||| | || || || |||| || || ||||| || Sbjct 77 TTAGCCTTGACGTTTTCAATGGAATCACTGGGCTCCACCTCCAGGGTGATGGTCTTTCCA 18 Query 82785 GTCAACGTCTTTACAAA 82801 |||| ||||| || || Sbjct 17 GTCAGGGTCTTCACGAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 978314556099648