Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20steindachneri_20[genbank_20GCA_5F001910785.1_202016-12- 20] 279,232 sequences; 648,011,071 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq247423 150 2e-31 >seq247423 Length=3941 Score = 150 bits (166), Expect = 2e-31 Identities = 139/176 (79%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 146986 AGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGG 147045 || || || | ||| || | |||||||||||| || | |||||||| || ||||| || Sbjct 2489 AGTCCTGTGATGTGTGCGATCATGTAGGTGAGAAGTGCATAGCTGGCGATATTGAAAGGC 2430 Query 147046 ACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCC 147105 ||||| || ||||| || || || | |||||| ||||| ||||| ||||| |||||| | Sbjct 2429 ACCCCGAGACCCATATCACCAGAGCGCTGGTAGAGCTGACACGACAGCTCGCCGTCGCAC 2370 Query 147106 ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGC 147161 ||||| ||||| |||||| ||||||| || ||||| |||||| ||||||||| || Sbjct 2369 ACGTAGAACTGACACAGGGTGTGGCAGGGTGGCAGAGCCATGAGGGGCAGGTCTGC 2314 Score = 93.3 bits (102), Expect = 5e-14 Identities = 119/163 (73%), Gaps = 6/163 (4%) Strand=Plus/Minus Query 147276 GTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTT 147335 |||| |||||||||||||||||||||||| || ||||| || ||||||||||| || Sbjct 480 GTACTCGGCCCCAAAGTGCCTCCACTGGAAACCATACACGGGTCCCAGGTCGCCTTCCTC 421 Query 147336 TCTGTGCGAGAAGCCCGCCCGCTTG---AGAAACTCGGGGGACCCGTGGGCGTCCCAGAT 147392 || | | ||||| || | ||| || || | ||||||| | ||||||||| || Sbjct 420 TCGATCTGTGAAGC---CCAGGTTGTCCAGGAAGTTCCGGGACCCATTGGCGTCCCAAAT 364 Query 147393 GCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCC 147435 ||| || || || ||||||||||| | || || || ||| Sbjct 363 CTTCACCCCTTTCGCTGAGAGCTCCTTGGCGTTTGTTGATCCC 321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581451393484800