Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20steindachneri_20[genbank_20GCA_5F001910785.1_202016-12- 20] 279,232 sequences; 648,011,071 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq95031 147 3e-30 >seq95031 Length=3790 Score = 147 bits (162), Expect = 3e-30 Identities = 646/1004 (64%), Gaps = 25/1004 (2%) Strand=Plus/Plus Query 104699 GATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGC 104758 || || |||| || || ||||| || || || |||||||||||||| ||| | | Sbjct 1661 GACCTTTTCTACGGCCTGTGGATCCCCGACCTGTTCATGAAGAGAGTGGAGAGCAACGAG 1720 Query 104759 AATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCGTGGGTGAGGA 104817 | |||||||| | ||||| || || || || | ||| ||| | ||| ||||| Sbjct 1721 GACTGGTCTCTGATGTGTCCCAACGAGTGCCCAGGGTTGGACGAGTGCTGGGGG-GAGGA 1779 Query 104818 GTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGG--CGACTGCGACGGTGCCA 104875 ||| ||| || ||||| || ||| ||| ||| | | | ||| |||| Sbjct 1780 GTTCGAAAAGCTCTACACCTCCTATGAG-AAGCAGGGGAAGTTCAAGCGCGT-GGTGAAG 1837 Query 104876 GCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATG 104935 ||| | ||||| | || || || |||| || || || |||||||| ||||||||| Sbjct 1838 GCTCAGCAGTTGTGGCACGCCGTTATCGAGTCCCAGACAGAAACTGGTACGCCATACATG 1897 Query 104936 CTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGT 104995 || |||||||||||||| ||| ||||| || ||| ||||| |||| |||||| Sbjct 1898 CTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAACAGAATCTGGGCACCATCAAGTCC 1957 Query 104996 TCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAAC 105055 ||| ||||| ||||||||| | || | || | | |||||| || |||||||| Sbjct 1958 AGCAACCTCTGCACAGAAATCATCGAGTACACCAGCCACGATGAGGTAGCGGTGTGTAAT 2017 Query 105056 CTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAA 105115 || || ||||| || ||| || ||| || || ||| ||| ||||| | | || Sbjct 2018 CTGGCCTCAATTGCGCTCAACATGTACGTCACCCCGGAG---CGGACTTTTGACTTTAAA 2074 Query 105116 AAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAAT 105175 ||||| || || ||| || ||| || | |||| | || || | || Sbjct 2075 AAACTGGCATCTGTGACCAAAGTAATCGTCAAGAATTTGAACAAGATCATCGAAATTAAC 2134 Query 105176 TTTTACCCCGTTGAGACTG-CTCGTAAA--TCTAATATGAGACACCGTCCAATTGGTCTC 105232 | || || || | | | || ||| || || | | | ||| | || ||||| | Sbjct 2135 TACTATCCAGT---GCCCGAAGCGGAAAAGTCCAACAAGCGCCACAGGCCGATTGGAATT 2191 Query 105233 GGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAA 105292 || || || ||| | ||||||| ||||| || || || | || || | | || Sbjct 2192 GGCGTCCAAGGTTTGGCGGATGCCTTCATCCTCATGCGTTACCCGTTCGAAAGCAAAGAG 2251 Query 105293 GCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGT 105352 || || | ||| | || || ||| |||| || |||||||| || |||||||| Sbjct 2252 GCTCAGCTGCTGAATATTCAAATCTTCGAGGCCATCTACCACGCCGCCCTGGAGGCGAGC 2311 Query 105353 TCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA-CA 105411 | ||| |||| | | || || || || || | | || ||||| | ||| || Sbjct 2312 TGCGAGCTGGCCGCCGAGCTCGGCCCCTACGAGACGTACGCAGGCTCTCC--CGTCAGCA 2369 Query 105412 AGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTAC--GACTGGGA 105468 |||| | || || | || |||||||| || ||| | ||| | |||| ||| Sbjct 2370 AGGGCATCCTGCAGTACGACATGTGGGAGAAGAAGCCCA--CCGAACTGCTGGACT-GGA 2426 Query 105469 AGCT-CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAA 105527 |||| || ||||| ||| | || | | ||||| || || |||| || | Sbjct 2427 AGCTGCTGAAGGAGAAGATCGCCATCCACGGCGTGAGGAACAGCCTGCTGCTGGCCCCGA 2486 Query 105528 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGA 105587 |||| || ||||||||||| || ||| |||| || || || | | | ||| ||||||| | Sbjct 2487 TGCCCACGGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCGAAGCCTACACCA 2546 Query 105588 CGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCG 105647 |||||||| | || |||| | ||||||||| ||| |||||| ||||| Sbjct 2547 GCAACATCTACACCCGCAGGGTCCTCTCCGGAGAGTTTCAGATCGTCAACCCTCATCTGC 2606 Query 105648 TGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 105691 | | ||||| | |||| || || ||| | |||| |||||| Sbjct 2607 TCAAAGACCTGACGGAGAGAGGGCTGTGGAGCGAGGAGATGAAG 2650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581224986503680