Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20steindachneri_20[genbank_20GCA_5F001910785.1_202016-12- 20] 279,232 sequences; 648,011,071 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq225895 134 2e-26 >seq225895 Length=7604 Score = 134 bits (148), Expect = 2e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 8372 TCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGG 8431 ||||| || ||||||||||||||||||||| | |||||||||||| ||| |||| ||| Sbjct 5289 TCTCCCCCAAAGGTGCTGGGCTTCCAGTACTCAGGGGAGCAGATGGGGTTTGCCAGCAGG 5230 Query 8432 CCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGA 8491 ||||| |||||||| ||||| |||| ||| | || |||||||| ||||| | | || Sbjct 5229 CCTTTCAGGGAGAAGGGAGCACCCATCTCCACCATACTCTCACCAAAGATACCAGTAGGG 5170 Query 8492 CGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAAAG 8550 || | ||||| | || | |||| ||| | ||||| ||| || | ||| ||||| || Sbjct 5169 CGTGCTTTTTCTAGTAAAAGGCCGGGGTAAAACTCCAAAGCATCTATGTCACCGTAGAG 5111 Score = 96.9 bits (106), Expect = 5e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 9242 TGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCA 9301 ||||||||| ||||||||||| || ||||| || ||| ||||||||| |||| Sbjct 3442 TGATGAGTCTGGTGGTCTGGAAGAGCTGCTCATCGTCCCAGGTGGGATGTTCTGCCTTCA 3383 Query 9302 GAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAG 9361 | | || || || ||||| || ||||| | ||| || |||| ||||| |||| || | Sbjct 3382 GGATGTCACAGACTCTGTTATGCTCCCTCAACCATATGGTGGAATACATGGTGAGGCCCG 3323 Query 9362 GTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGC 9399 | | |||||||| ||| ||||||| ||||||||| Sbjct 3322 GCAGGAGGCCAAATAACTCATGACCGATGGCCAGACGC 3285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 714374613217280