Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq152 158 1e-33 >seq152 Length=5132711 Score = 158 bits (174), Expect = 1e-33 Identities = 141/177 (80%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || ||| || |||| |||||||| ||||||||| || || | ||||||||| || ||||| Sbjct 3436283 CTTGAGTCCTGTGATGTGGGCGATCATGTAGGTAAGAAGTGCGTAGCTGGCGATATTGAA 3436342 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 ||||| ||||| ||||| || || ||||||||||||||||| || || ||||| || | Sbjct 3436343 AGGCACTCCCAGACCCATATCACCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCATC 3436402 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTC 145922 |||| ||||||||| ||| ||||||||| ||||| ||||| ||||||||| Sbjct 3436403 ACACACGCTGAACTGGCAGAGGGCGTGGCAGGGGGGCAGAGCCATTTGGGGCAGGTC 3436459 Score = 93.3 bits (102), Expect = 5e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 146047 GCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGC 146106 || || ||||||||||||||||| || || || || |||||||| || ||| |||| Sbjct 3436888 GCACCAAAGTGCCTCCACTGGAAACCATACACAGGTCCCAGGTCGCCCTCCTCTCTGTCT 3436947 Query 146107 CCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCC 146166 | |||| | | ||||| | ||||||||||||||| ||||||||||| || || Sbjct 3436948 GTGAACCCGAGATTGTCCAGGAACTGCCGGGACCCGTTGGCCTCCCAGATCTTCACCCCT 3437007 Query 146167 CTCGCGGAGAGCTCATTGG 146185 || | |||||||| |||| Sbjct 3437008 TTCTCCGAGAGCTCCTTGG 3437026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590073967631360