Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq136 107 4e-18 >seq136 Length=1264375 Score = 107 bits (118), Expect = 4e-18 Identities = 394/611 (64%), Gaps = 7/611 (1%) Strand=Plus/Plus Query 248800 TACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTC 248859 |||| || |||||| ||| | ||||||| ||||| || |||||| ||||| || Sbjct 715957 TACGACAGAGATTTCTCCTACAACTTCTTTGGCTTCAAGACTCTGGAGCGGTCGTACCTG 716016 Query 248860 CTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTC 248919 | || || ||||| | | || || ||||||||| | ||| ||||| ||||| Sbjct 716017 TTGAAGATCACCGGCAAAGTGGCTGAGCGTCCGCAGCACATGCTCATGAGAGTGTCTGTC 716076 Query 248920 GGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGC 248979 || || ||||| ||| || || | | ||||| |||| | || || | Sbjct 716077 GGCATCCACAAAACTGATATCGATGCAGCCATTGAGACCTACAACCTTCTGTCAGAGAGG 716136 Query 248980 TGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGC 249039 ||| | || || || | || || ||||||||||| || ||| || |||||| | Sbjct 716137 TGGTTCACCCACGCTTCTCCTACACTCTTCAACGCAGGAACCAACAGGCCACAGCTGT-C 716195 Query 249040 TCG-TGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAA 249098 | | ||||| || ||||||||| | || ||| | || ||||||||||||||||| || Sbjct 716196 TAGCTGCTTCCTGCTTGCCATGAAGGATGACAGCATTGAAGGCATTTATGACACGCTGAA 716255 Query 249099 ACAGACGGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCG 249158 || || || || |||| || || ||||||||| | | ||| | |||| | Sbjct 716256 GCATTGTGCCCTCATCTCCAAATCGGCTGGAGGAATCGGTGTGGCGGTCAGCTGCATCAG 716315 Query 249159 AGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCT 249218 | | | ||| |||||| || ||||| || | | ||||| | || ||| | || Sbjct 716316 ATCAACGGGGAGCTACATCGCTGGCACAAACGGCAACTCTAATGGTCTGGTCCCCATGCT 716375 Query 249219 TCGATGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTC 249275 || | | ||| || | | || |||||| ||| | || ||| | Sbjct 716376 GAGAGTTTACAACAACACGGCGCGTTATGTCGACCAGGGCGGCAACAAGAGACCGGGAGC 716435 Query 249276 GTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAA 249335 ||||||||||| |||| |||||| || | || || |||||||| |||| || Sbjct 716436 CTTCGCCATGTACCTGGAGCCATGGCACTTTGACGTGTTTGACTTCCTGGAGCTGAAGAA 716495 Query 249336 GAACAACGGCAACGA-GCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCG 249394 ||||| || || || | || || || | || || || || | |||||| || | | Sbjct 716496 GAACACGGGTAAGGATGAGCA-AAGGGCCAGAGATCTTTTTTATGCACTGTGGATCCCTG 716554 Query 249395 ACTTGTTCATG 249405 ||||||||||| Sbjct 716555 ACTTGTTCATG 716565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073761117069312