Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq125 158 9e-34 >seq125 Length=2234842 Score = 158 bits (174), Expect = 9e-34 Identities = 223/308 (72%), Gaps = 4/308 (1%) Strand=Plus/Plus Query 91799 CATTTCCCTGTCTTTTCCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA 91858 || ||||| ||| |||||||| ||||||| || ||||||| ||||| | ||| ||| Sbjct 415012 CACTTCCCCACCTTCTCCTGCAAGGAGGACTGCAGGATCATCACAGACACAG-CAGCCAA 415070 Query 91859 -CTGGAACAAAGTGGCTTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCT 91917 ||||| | ||||||||||||||||| || |||| || ||||| || || || ||||| Sbjct 415071 GCTGGAGCGCAGTGGCTTCTACTGGGGACCACTGGGTGTGGAGGACGCTCACCGCATGCT 415130 Query 91918 GCGCAACTCGGCACTGGGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTGTT 91977 ||| || | | ||||||||||| ||||| || || ||| |||| |||||| | || || Sbjct 415131 GCGGGACGCTCCGCTGGGCAGCTTCCTCATCCGCGACAGCCGGCAGAAGGACATTTTCTT 415190 Query 91978 CACGCTGTCGTATCACTCTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAG-GACA 92036 ||| ||||| || ||| | || ||| || ||||| ||| | || | |||||| | || Sbjct 415191 CACACTGTCCTACCACGCCAAGAGCGGGCCGGTCAGCGTGCGCATCGCCTACAAGCGGCA 415250 Query 92037 AGCAATTTTCCTTGGCTGGGAGCAAACAGAGGTTTTCATCGGTCCTTCTCCTGTTGGACC 92096 | | || || ||||| || | | | | || | || || | ||||||||| | Sbjct 415251 A-AAGTTCTCATTGGCGGGCAACGAGCGCTCCTTCCCGACGCTCTTCGCCCTGTTGGAGC 415309 Query 92097 ATTACATC 92104 |||||||| Sbjct 415310 ATTACATC 415317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356231932826752