Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq136 138 2e-27 >seq136 Length=1264375 Score = 138 bits (152), Expect = 2e-27 Identities = 347/525 (66%), Gaps = 18/525 (3%) Strand=Plus/Plus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866 |||||||||||| | | ||| || || || ||||| ||| | ||||| | | | || Sbjct 716341 ACAAACGGCAACTCTAATGGTCTGGTCCCCATGCTGAGAGTTTACAACAACACGGCGCGT 716400 Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 || || ||||||||||| || | || || || | ||| | ||| |||| || ||| Sbjct 716401 TATGTCGACCAGGGCGGCAACAAGAGACCGGGAGCCTTCGCCATGTACCTGGAGCCATGG 716460 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 ||| ||||| |||||||| | ||| || || ||| | || || ||| | | Sbjct 716461 CACTTTGACGTGTTTGACTTCCTGGAGCTGAAGAAGAACACGGGTAAGGATGAGCAAAGG 716520 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT------C 97040 ||||| || | ||||||||||| ||| | || || |||||||||||| | || | Sbjct 716521 GCCAGAGATCTTTTTTATGCACTGTGGATCCCTGACTTGTTCATGAAGAGAGTGGAGAGC 716580 Query 97041 AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGC 97100 ||| | | ||||| || ||||| || || || ||||| ||| ||| ||| Sbjct 716581 AACCAAG------ACTGGTCTCTGATGTGTCCGAACGAGTGCCCCGGGCTGGACGAATGC 716634 Query 97101 TGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGA 97160 ||||| || ||||||||| ||||| || ||| | ||||| || || | Sbjct 716635 TGGGGGGAGGAGTTTGAGCAGCTCTACACCAAATATGAGAAGGAGGG--GA-GGGTCAAG 716691 Query 97161 CGAGTCG---ATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGA 97217 ||||| | | || | | ||||| | ||||| | | ||| ||| || || Sbjct 716692 CGAGTGGTGAAGGCTCAGCAGGTGTGGTATGCCATTATTGAATCCCAGACAGAAACGGGT 716751 Query 97218 ACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGC 97277 || |||||||| || ||||| || || || | || |||||||| | | ||||| Sbjct 716752 ACACCGTACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGGGC 716811 Query 97278 ACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCC 97322 |||||||| || ||| || ||||| |||||||| || ||| || Sbjct 716812 ACCATCAAATGCAGCAACCTCTGCACAGAAATTGTTGAATACACC 716856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741055642915840