Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq152 114 9e-21 >seq152 Length=5132711 Score = 114 bits (126), Expect = 9e-21 Identities = 131/175 (75%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||||| ||||| ||||| || || | |||||||||||| || ||||| ||||| ||||| Sbjct 3436872 CATGTTTGTGTATTCTGCACCAAAGTGCCTCCACTGGAAACCATACACAGGTCCCAGGTC 3436931 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892 || || || |||| || || || |||| || | | ||| || ||||| || Sbjct 3436932 GCCCTCCTCTCTGTCTGTGAACCCGAGATTGTCCAGGAACTGCCGGGACCCGTTGGCCTC 3436991 Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 25946 ||||||||| ||||| ||||| |||||||| |||| ||||| || |||| |||| Sbjct 3436992 CCAGATCTTCACCCCTTTCTCCGAGAGCTCCTTGGCATTTGTCGATCCCTGTGAC 3437046 Score = 82.4 bits (90), Expect = 5e-11 Identities = 115/160 (72%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || |||||||| || || || |||||||||||| || || || || || | ||||| Sbjct 3436302 GCGATCATGTAGGTAAGAAGTGCGTAGCTGGCGATATTGAAAGGCACTCCCAGACCCATA 3436361 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 || || || | |||||| ||||||||||| ||||| | || | |||| ||||| || Sbjct 3436362 TCACCT-GAGCGCTGGTACAGCTGACACGACAGCTCGCCATCACACACGCTGAACTGGCA 3436420 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCT 25665 | || || ||| || || ||||| || || || |||| Sbjct 3436421 GAGGGCGTGGCAGGGGGGCAGAGCCATTTGGGGCAGGTCT 3436460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340136008156032