Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq136 219 1e-51 >seq136 Length=1264375 Score = 219 bits (242), Expect = 1e-51 Identities = 579/870 (67%), Gaps = 18/870 (2%) Strand=Plus/Plus Query 363447 TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGA 363506 ||| || |||||||| ||| | ||| | || || | || ||||| | ||| | || Sbjct 716040 TGAGCGTCCGCAGCACATGCTCATGAGAGTGTCTGTCGGCATCCACAAAACTGATATCGA 716099 Query 363507 TGCCGCGATTGAAACATATAAGCTTCTA--AGTGCTCGTGTATTCACGCACGCCACGCCA 363564 ||| || ||||| || || || ||||| || | ||| ||||| ||||| | || Sbjct 716100 TGCAGCCATTGAGACCTACAACCTTCTGTCAGAGAG-GTGG-TTCACCCACGCTTCTCCT 716157 Query 363565 ACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATG 363624 ||| | | ||| || ||||| | |||||| ||||| ||||| || || ||| Sbjct 716158 ACACTCTTCAACGCAGGAACCAACAGGCCACAGCTGTCTAGCTGCTTCCTGCTTGCCATG 716217 Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684 ||||| || ||| || || || | |||||| || ||| ||||||| || || ||||| Sbjct 716218 AAGGATGACAGCATTGAAGGCATTTATGACACGCTGAAGCATTGTGCCCTCATCTCCAAA 716277 Query 363685 AATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGC 363744 || || ||||| ||||| || || | | | || | || ||||| ||| Sbjct 716278 TCGGCTGGAGGAATCGGTGTGGCGGTCAGCTGCATCAGATCAACGGGGAGCTACAT-CGC 716336 Query 363745 -GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803 |||||| || |||| ||||| ||||| |||||||| | || | |||| || || Sbjct 716337 TGGCACAAACGGCAACTCTAATGGTCTGGTCCCCATGCTGAGAGTTTACAACAACACGGC 716396 Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863 | | || ||||||||||| || ||| | || || || || ||||| || ||||| Sbjct 716397 GCGTTATGTCGACCAGGGCGGCAACAAGAGACCGGGAGCCTTCGCCATGTACCTGGAGCC 716456 Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923 || || | ||||| || || ||||| ||| |||||||| || || || Sbjct 716457 ATGGCACTTTGACGTGTTTGACTTCCTGGAGCTGAAGAAGAACACGGGTAAGGATGAGCA 716516 Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983 | || | ||||| || |||||||| ||| | ||||| || |||||| | ||||| Sbjct 716517 AAGGGCCAGAGATCTTTTTTATGCACTGTGGATCCCTGACTTGTTCATGAAGAGAGTGGA 716576 Query 363984 G-GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTAT 364042 | ||| ||| | ||||| || | || || |||| || || || || ||| | Sbjct 716577 GAGCAACCAAG-ACTGGTCTCTGATGTGTCCGAACGAGTGCCCCGGGCTGGACGAATGCT 716635 Query 364043 GGGGTGACGACTAT--GTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAA 364100 |||| || || | | | |||||| || ||| ||||| |||||| ||| || || Sbjct 716636 GGGGGGAGGAGTTTGAGCAGCTCTACACCAAA--TATGAGAAGGAGGG-GAGGGTC--AA 716690 Query 364101 GACA---ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGG 364157 | | | || ||| || | |||| |||||| || || || |||| || || || Sbjct 716691 GCGAGTGGTGAAGGCTCAGCAGGTGTGGTATGCCATTATTGAATCCCAGACAGAAACGGG 716750 Query 364158 AACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGG 364217 ||||| || ||| |||||||||| | |||||| | ||| |||||||||| | || || Sbjct 716751 TACACCGTACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGGG 716810 Query 364218 TACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGAC 364277 || || | |||||||| || || || ||| ||||||||||| | ||| ||| Sbjct 716811 CACCATCAAATGCAGCAACCTCTGCACAGAAATTGTTGAATACACCAGCCACGATGAGGT 716870 Query 364278 TGCCGTATGTAACCTTGCGTCGATCGCGCT 364307 || || ||||| || || || ||||| || Sbjct 716871 GGCGGTGTGTAATCTGGCCTCCATCGCTCT 716900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303347187500288