Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq166 104 2e-17 seq81 104 2e-17 >seq166 Length=972737 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | ||||| || | || ||| | || |||||| ||| | Sbjct 969225 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTCGAGCCCAGC 969284 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | ||||| || || |||||||||||||| ||||| || || Sbjct 969285 GACACCATTGAGAATGTCAAGGCCAAAATCCAGGACAAAGAAGGCATCCCTCCAGACCAG 969344 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | || ||||||||| || ||||||| | | | | || ||| || ||| Sbjct 969345 CAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCCGACTACAAC 969404 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || || || || || | ||| | ||| | | |||| ||||| Sbjct 969405 ATCCAGAAGGAGTCCACCCTCCATCTTGTGCTCCGTCTGAGGGGAGG 969451 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | ||||| || | || || | || ||||| ||| | Sbjct 969453 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTGGAGGTCGAACCCAGC 969512 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | |||||| ||||| || || |||||||| || || || || Sbjct 969513 GACACCATTGAGAATGTCAAAGCTAAGATCCAGGATAAGGAAGGCATCCCCCCAGACCAG 969572 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | | |||||||| || ||||| | | | | | || ||| || ||| Sbjct 969573 CAGCGTCTCATCTTTGCTGGCAAGCAGCTGGAAGACGGCCGCACCCTCTCCGACTACAAC 969632 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || || || || || || | ||| | ||| | | ||||||||||| Sbjct 969633 ATCCAGAAGGAGTCCACCCTCCATCTTGTGCTCCGTCTGAGAGGAGGA 969680 >seq81 Length=8687835 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||| || | || ||| | || || ||| ||| | Sbjct 2926648 ATGCAGATCTTTGTCAAGACCCTCACTGGTAAGACCATCACCCTGGAGGTTGAGCCCAGC 2926707 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || || ||||| ||||| |||||||| || || || || Sbjct 2926708 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 2926767 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | | ||||||||| || ||||||| | | | | || || || ||| Sbjct 2926768 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCAGACTACAAC 2926827 Query 24171 ATTCAAAAAGAATCTAC 24187 || || ||||||||||| Sbjct 2926828 ATCCAGAAAGAATCTAC 2926844 Score = 98.7 bits (108), Expect = 9e-16 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 23986 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGG 24045 |||| ||||| | ||||| || || | ||||| || | || ||| | || || ||| Sbjct 2925731 ACAACATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTTGAGC 2925790 Query 24046 CCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCG 24105 ||| ||| ||||| ||| | ||||| ||| || || || |||||||| || || | Sbjct 2925791 CCAGCGATACCATTGAGAATGTCAAGGCAAAAATCCAGGATAAGGAAGGCATTCCCCCAG 2925850 Query 24106 ATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATT 24165 |||| ||||| ||||| | | ||||||||| || ||||||| | | | | || | Sbjct 2925851 ATCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTGTCTGACT 2925910 Query 24166 ATAACATTCAAAAAGAATCTAC 24187 | ||||| || ||||||||||| Sbjct 2925911 ACAACATCCAGAAAGAATCTAC 2925932 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | ||||| || | || ||| | || || ||| ||| Sbjct 2925964 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCCAGT 2926023 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | ||||| ||||| ||||| |||||||| || || ||||| Sbjct 2926024 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 2926083 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | | |||||||| || ||||||| | | | | || || || ||| Sbjct 2926084 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCAGACTACAAC 2926143 Query 24171 ATTCAAAAAGAATCTAC 24187 || || ||||||||||| Sbjct 2926144 ATCCAGAAAGAATCTAC 2926160 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||| || | || ||| | || || ||| ||| | Sbjct 2927104 ATGCAGATCTTTGTCAAGACCCTCACTGGTAAGACCATCACCCTTGAGGTTGAGCCCAGC 2927163 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || || ||||| ||||| |||||||| || || || || Sbjct 2927164 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 2927223 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | | ||||||||| || ||||||| | | | | || || || || Sbjct 2927224 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAAT 2927283 Query 24171 ATTCAAAAAGAATCTAC 24187 || || ||||||||||| Sbjct 2927284 ATCCAGAAAGAATCTAC 2927300 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | ||||| || | || ||| | || || || ||| | Sbjct 2939269 ATGCAAATCTTCGTCAAGACCCTCACTGGTAAGACCATCACCCTTGAGGTTGAACCCAGC 2939328 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | ||||| ||||| ||||| |||||||| || || || || Sbjct 2939329 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 2939388 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | | ||||||||| || ||||||| | | | | | || || ||| Sbjct 2939389 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 2939448 Query 24171 ATTCAAAAAGAATCTAC 24187 || || ||||||||||| Sbjct 2939449 ATCCAGAAAGAATCTAC 2939465 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | ||||| || | || ||| | || || ||| | | Sbjct 2926192 ATGCAGATCTTCGTCAAGACCCTCACTGGTAAGACCATCACCCTTGAGGTTGAGCCAAGT 2926251 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | ||||| ||||| ||||| |||||||| || || || || Sbjct 2926252 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 2926311 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | | ||||||||| || ||||||| | | | | || || || ||| Sbjct 2926312 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCAGACTACAAC 2926371 Query 24171 ATTCAAAAAGAATCTAC 24187 || || ||||||||||| Sbjct 2926372 ATCCAGAAAGAATCTAC 2926388 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | ||||| || | || ||| | || || || ||| | Sbjct 2927332 ATGCAGATCTTCGTCAAGACCCTCACTGGTAAGACCATCACCCTGGAGGTTGAACCCAGC 2927391 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | ||||| ||||| ||||| |||||||| || || || || Sbjct 2927392 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 2927451 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | | ||||||||| || ||||||| | | | | | || || ||| Sbjct 2927452 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 2927511 Query 24171 ATTCAAAAAGAATCTAC 24187 || || ||||||||||| Sbjct 2927512 ATCCAGAAAGAATCTAC 2927528 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | ||||| || | || ||| | || || ||| | | Sbjct 2939041 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTTGAGCCAAGT 2939100 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | ||||| ||||| ||||| |||||||| || || || || Sbjct 2939101 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 2939160 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | | ||||||||| || ||||||| | | | || || || ||| Sbjct 2939161 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCTGACTACAAC 2939220 Query 24171 ATTCAAAAAGAATCTAC 24187 || || ||||||||||| Sbjct 2939221 ATCCAGAAAGAATCTAC 2939237 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | ||||| || | || ||| | || || ||| ||| | Sbjct 2939497 ATGCAAATCTTCGTCAAGACCCTCACTGGTAAGACCATCACCCTGGAGGTTGAGCCCAGC 2939556 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || || ||||| ||||| |||||||| || || || || Sbjct 2939557 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 2939616 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | | ||||||||| || ||||||| | | | | || || || Sbjct 2939617 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTGTCTGACTACAAT 2939676 Query 24171 ATTCAAAAAGAATCTAC 24187 || || ||||||||||| Sbjct 2939677 ATCCAGAAAGAATCTAC 2939693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429933987899520