Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq136 529 2e-145 seq119 96.9 4e-15 >seq136 Length=1264375 Score = 529 bits (586), Expect = 2e-145 Identities = 1305/1972 (66%), Gaps = 17/1972 (1%) Strand=Plus/Minus Query 62098 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 62157 ||||||||||||| | || || | | ||||| ||||| || ||||| | | ||| Sbjct 717549 CTGAATGGATCCATTGTGAGCTATCAGCTGGTTCTTCATCTCCTCGTTCCACAGTCCTCT 717490 Query 62158 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 62217 ||| || | | | || ||||| ||||| || | ||||| ||||| || | || || Sbjct 717489 CTCCGTCAGGTCCTTGAGCAGATGAGGATTGACGATCTGAAACTCTCCGGAGAGGACCCT 717430 Query 62218 CCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGC 62277 || ||||| || || || || || | || | |||||| || || |||| || || || Sbjct 717429 GCGGGTGTAGATGTTGCTTGTGTAGGCCTCAATAGACTCGTTGTTGCCCAGGATCTGGGC 717370 Query 62278 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGAT 62337 || || || || ||||| || |||| || | || || || | |||| | ||| Sbjct 717369 GGTGGAGGCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGCTTGGCGAT 717310 Query 62338 TTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNN 62397 || || || || | | ||| | || || || | || | | Sbjct 717309 CTTCTCCTTCAGCAGCTTCCAGTCGCACAGGTCAGTGGG--CGTCTTCTCCCACATGTCG 717252 Query 62398 T--TGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTC 62455 | || || | || || ||| | || ||| |||| || ||||| || || || Sbjct 717251 TACTGGAGGGTGCCCTTGCTGACAGGAGAGCCTTCATACGTCTCGTAGGGGCCGAGCTCG 717192 Query 62456 TCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTA 62515 | || || || || || ||||| | || |||| || ||||| || ||||| | | Sbjct 717191 GCGGCCAGCTCGCAGCTTGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATGTGGATG 717132 Query 62516 TTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCT 62575 || || || || || |||| ||||| || | | | || || || || || || Sbjct 717131 TTGAGCAGCTGAGCCTCGGGGCTTTCAAAGGGGTGACGCATCAGGATGAAGGCATCAGCC 717072 Query 62576 AATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGA 62635 || || |||||||| || || || || | || | ||| || || | || ||||| Sbjct 717071 AAACCCTGAACACCGATTCCTATTGGCCGGTGGCGCTTGTTGGACCTCTCGGCTTCAACC 717012 Query 62636 ATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACA 62695 | ||||| || ||||| ||||| || || || || || |||| ||||||||| |||| Sbjct 717011 ACTGGATAGTAGTTAATGTCTATGATCTTGTTCAGGTTCTTGACGATTACTTTGGTCACA 716952 Query 62696 TCCTTCAGTTTGAGAAAATCAAAT---CGCCCATCTATTACAAACATGTTCAATGCAACA 62752 | |||||| ||| ||||| ||| || | || ||||||| | || | Sbjct 716951 TATGACAGTTTTTTAAAGTCAAAGGTCCGCTCAGGGGTGACGTACATGTTGAGAGCGATG 716892 Query 62753 GATGCCAGATTACAAACGGCTACCTCAT--TAGCATCCGCATATTGTATTATCTCAGTGC 62810 || ||||||||||| || || ||||||| | || | |||| | || || |||| Sbjct 716891 GAGGCCAGATTACACACCGCCACCTCATCGTGGCTGGTG--TATTCAACAATTTCTGTGC 716834 Query 62811 AAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCAT 62870 | || || || || |||||||| || | ||| || || || ||||| |||| || || | Sbjct 716833 AGAGGTTGCTGCATTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGT 716774 Query 62871 CCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA 62930 | || || || ||| | || ||||| ||||| |||| ||||| ||||| || | ||| | Sbjct 716773 CTTTGTACAGCATGTACGGTGTACCCGTTTCTGTCTGGGATTCAATAATGGCATACCACA 716714 Query 62931 CGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATC 62990 | ||||||| | | ||| ||| || | || ||| || || | Sbjct 716713 CCTGCTGAGCCTTCACCACTCGCTTGACCCTCCCCTCCTTCTCATATTTGGTGTAGAGCT 716654 Query 62991 GTTCGAACTCGTCTCCCCAAACATT-GTCCAGTCCAGGACATTCATCCGGACACATCAAC 63049 | || ||||| || ||||| |||| |||||| || || || || | ||||||||||| Sbjct 716653 GCTCAAACTCCTCCCCCCAG-CATTCGTCCAGCCCGGGGCACTCGTTCGGACACATCAGA 716595 Query 63050 GACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA 63109 ||||| ||| || || ||||| ||||| || | ||||| ||||| || || | Sbjct 716594 GACCAGTCTTGGTTGCTCTCCACTCTCTTCATGAACAAGTCAGGGATCCACAGTGCATAA 716535 Query 63110 AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCC 63169 || |||||||||| || || || || || || || ||||| || || || ||||| | Sbjct 716534 AAAAGATCTCTGGCCCTTTGCTCATCCTTACCCGTGTTCTTCTTCAGCTCCAGGAAGTCA 716475 Query 63170 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 63229 | | ||| | ||||| || |||| ||| ||||| | |||| || | ||||| || Sbjct 716474 AACACGTCAAAGTGCCATGGCTCCAGGTACATGGCGAAGGCTCCCGGTCTCTTGTTGCCG 716415 Query 63230 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 63289 ||||| || | || | || ||||| || |||||||||| ||| || | | |||||| Sbjct 716414 CCCTGGTCGACATAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACCAGACCATTA 716355 Query 63290 GATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGA 63349 || | || || || || | ||| ||||| || | | | || || | | | | Sbjct 716354 GAGTTGCCGTTTGTGCCAGCGATGTAGCTCCCCGTTGATCTGATGCAGCTGACCGCCACA 716295 Query 63350 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 63409 || ||||| || ||| ||| ||||| | || || | || | ||| ||||| ||||| Sbjct 716294 CCGATTCCTCCAGCCGATTTGGAGATGAGGGCACAATGCTTCAGCGTGTCATAAATGCCT 716235 Query 63410 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 63469 || || || |||||| ||||| ||| || || |||||||||| || | | | ||| Sbjct 716234 TCAATGCTGTCATCCTTCATGGCAAGCAGGAAGCAGCTAGACAGCTGTGGCCTGTTGGTT 716175 Query 63470 CCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTAC 63529 || || || || | |||||||||||||| || ||||| | || || || || ||||| Sbjct 716174 CCTGCGTTGAAGAGTGTAGGAGAAGCGTGGGTGAACCACCTCTCTGACAGAAGGTTGTAG 716115 Query 63530 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63589 |||||||| |||| || ||||| || || || || || | || | ||| | |||| Sbjct 716114 GTCTCAATGGCTGCATCGATATCAGTTTTGTGGATGCCGACAGACACTCTCATGAGCATG 716055 Query 63590 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63649 ||||| || | ||| | | ||| | | || ||||||| ||| || |||| ||| Sbjct 716054 TGCTGCGGACGCTCAGCCACTTTGCCGGTGATCTTCAACAGGTACGACCGCTCCAGAGTC 715995 Query 63650 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTA 63709 || || ||||| ||||||| || || |||| |||||||| || |||||||||| Sbjct 715994 TTGAAGCCAAAGAAGTTGTAGGAGAAATCTCTGTCGTAAATGATGGCCGAGTTGAGGCGG 715935 Query 63710 TCCTTATATTTGTTAACTACATCCATGGTAATACTT-GAAATAATAGGAAAATGTTTCCC 63768 || || | | ||| | || | ||| | ||| || || || || | ||||| Sbjct 715934 TCTTTGTTCTCAAGAACAATGTCGAGGGT-CTCCTTGGAGATCATGGGGGAGTGTTTTTT 715876 Query 63769 ATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGT 63828 ||| ||| |||| |||||| | | ||||||||||| ||||| || | ||| || || Sbjct 715875 ATTCAGAGGGTTGATGTAGTTGTACAGGTCCTCCATCACCTCACTGAACACTTTCTTCGT 715816 Query 63829 TTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTG 63888 |||||||| || || || || || || | || || || ||||| || || || |||| Sbjct 715815 CTCTTTGTGCAGGTTGGAAACAGCGATCCGTGCAGCGAGGATGGCGTAGTCGGGGTGTTT 715756 Query 63889 TGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACC 63948 || || |||||| || || || |||||||| ||||| | || || || || || || Sbjct 715755 GGTTGTGAGAGTGGCGGCGATCTCAGCTGCCAGCGTGTCGAGCTCCACGGTGGTGACTCC 715696 Query 63949 ATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTT 64008 | || | || || || |||||||| | |||| || || | | |||| ||| Sbjct 715695 GCTGTACAAACCCTGAATCACCTTCATGGTGATTTGGGCCGGGTCCACAAAGTCAGAGTT 715636 Query 64009 TAAGCCATAACATAATTTTCT-AATACGAGATGTGATTTTATCAAACATGAC 64059 | ||||| || || |||| || ||||| ||||||||||| |||||||| Sbjct 715635 CAGTCCATAGCA-AAGCTTCTGGATGCGAGAGGTGATTTTATCGAACATGAC 715585 >seq119 Length=8001379 Score = 96.9 bits (106), Expect = 4e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 63467 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTG 63526 || || ||||| || | ||||| || || || || ||||| || || || |||| ||| Sbjct 7002315 GTGCCAGCATTGAACAGTGTAGGTGAGGCATGGGTGAACCACTTCTCTGACAGTAAGTTG 7002256 Query 63527 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 63586 || |||||||| |||| || || || | || |||||| || || || || | ||||||| Sbjct 7002255 TAGGTCTCAATGGCTGCATCAATGTCTCCTTTATGAATCCCGACAGCCACTCTCATTAAC 7002196 Query 63587 ATGTGCTGAGGTCTTTCA 63604 |||||||| ||||| ||| Sbjct 7002195 ATGTGCTGGGGTCTCTCA 7002178 Score = 95.1 bits (104), Expect = 2e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 62800 TATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTT 62859 |||||| ||||| |||||||| | |||||||| || ||||| || || || ||||| | Sbjct 7003604 TATCTCTGTGCATAGATTACTGGATTTGATGGTGCCCAAATTCTGCTGGTTGCTCTTCCT 7003545 Query 62860 GTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAAT 62919 || || || ||||| || || ||| |||| ||||||||||| |||| || || || || Sbjct 7003544 ATTGCAGGCGTCCTTGTAGAGCATGTATGGTGTACCAGTTTCTGTCTGTGACTCGATGAT 7003485 Query 62920 CGCTTTCCAGAC 62931 || | ||| || Sbjct 7003484 GGCATACCACAC 7003473 Score = 82.4 bits (90), Expect = 1e-10 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 63070 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 63129 |||||||||||||||||| || || ||||| | ||| | || || ||||||| || || Sbjct 7003075 CACTCGTTTCATAAAGAGGTCCGGGATCCACATAGCGAAGAACAGGTCTCTGGCCCTCTG 7003016 Query 63130 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63189 ||||| || ||||| ||||| || | || | ||| | | | ||| |||||||||| Sbjct 7003015 CTCCTCTTTACCTGTGTTCTTCTTCAACTCCAAGAAGTCAAACACATCGAAATGCCACGG 7002956 Query 63190 TTCCA 63194 |||| Sbjct 7002955 CTCCA 7002951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633628958566400