Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq81 104 2e-17 >seq81 Length=8687835 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 111184 AAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111243 || ||||| || ||||| || || | || ||||| ||||| ||| |||| || ||| Sbjct 2925733 AACATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTTGAGCCC 2925792 Query 111244 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111303 |||||| | ||| | || || |||||| || || |||||| ||||| ||| Sbjct 2925793 AGCGATACCATTGAGAATGTCAAGGCAAAAATCCAGGATAAGGAAGGCATTCCCCCAGAT 2925852 Query 111304 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111363 || || ||||| || | ||| ||||| || |||||||| | || || | || || Sbjct 2925853 CAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTGTCTGACTAC 2925912 Query 111364 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || || ||||||||||| || ||| | || |||||||| | ||||| Sbjct 2925913 AACATCCAGAAAGAATCTACCCTCCATCTTGTCCTGCGTCTGAGAGGTGG 2925962 Score = 102 bits (112), Expect = 7e-17 Identities = 165/236 (70%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||| || ||||| || | || || || ||||| ||| |||| || |||||| Sbjct 2939497 ATGCAAATCTTCGTCAAGACCCTCACTGGTAAGACCATCACCCTGGAGGTTGAGCCCAGC 2939556 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || || || || ||||| |||||| ||||| || || Sbjct 2939557 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 2939616 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || ||||| || | ||| ||||| || |||||||| | || || | || || ||| Sbjct 2939617 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTGTCTGACTACAAT 2939676 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG-CAATAAAT 111421 || || ||||||||||| || ||| | || |||||||| | ||||| |||||||| Sbjct 2939677 ATCCAGAAAGAATCTACCCTCCATCTTGTCCTGCGTCTGAGGGGTGGTCAATAAAT 2939732 Score = 82.4 bits (90), Expect = 6e-11 Identities = 160/235 (68%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || || ||||| || | || || || ||||| ||| |||| ||||||||| Sbjct 2927332 ATGCAGATCTTCGTCAAGACCCTCACTGGTAAGACCATCACCCTGGAGGTTGAACCCAGC 2927391 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || || || || ||||| |||||| ||||| || || Sbjct 2927392 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 2927451 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || ||||| || | ||| ||||| || |||||||| || || | || || || Sbjct 2927452 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 2927511 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGG-TGGCAATAAA 111420 || || ||||||||||| || ||| | || |||||||| | || |||| |||| Sbjct 2927512 ATCCAGAAAGAATCTACCCTCCATCTTGTCCTGCGTCTGAGGGGCGGGCAGTAAA 2927566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423038020172800