Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq136 192 7e-44 seq65 96.9 4e-15 seq119 86.0 7e-12 >seq136 Length=1264375 Score = 192 bits (212), Expect = 7e-44 Identities = 835/1300 (64%), Gaps = 32/1300 (2%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||| | ||||| |||| ||||| |||| ||| |||||||||||| Sbjct 717422 TAGATGTTGCTTGTGTAGGCCTCAATAGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 717363 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 ||||||||||| || |||| || |||||||| | | || | | || ||| Sbjct 717362 GCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGCTTGGCGATCTTCTCC 717303 Query 114062 TTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGA 114119 || || | ||||||| | | | || | | | | || |||||| || |||||| Sbjct 717302 TTCAGCAGCTTCCAGTCGCACAGGTCAG--TGGGCGTCTTCTCCCACATGTCGTACTGGA 717245 Query 114120 GGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCA 114179 || | || | | | | || || || ||| | |||||||| ||||| | | |||| Sbjct 717244 GGGTGCCCTTGCTGACAGGAGAGCCTTCATACGTCTCGTAGGGGCCGAGCTCGGCGGCCA 717185 Query 114180 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTG 114239 ||| |||| ||||| ||||| |||| || || |||||||| ||| | || | Sbjct 717184 GCTCGCAGCTTGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATGTGGATGTTGAGCA 717125 Query 114240 CCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTT 114299 || |||||| | ||||| | | | || || || || |||| || | ||| | Sbjct 717124 GCTGAGCCTCGGGGCTTTCAAAGGGGTGACGCATCAGGATGAAGGCATCAGCCAAACCCT 717065 Query 114300 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT-TCGAGCGGTCTCCACGGGA 114358 | ||||||| || ||||| || || | | | || ||| | ||| || |||| ||| Sbjct 717064 GAACACCGATTCCTATTGGCCGGTGGCGCTTGTTGGACCTCTCG-GCTTCAACCACTGGA 717006 Query 114359 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 114418 || | || | || || | | | || || || ||| || || || || | | |||| Sbjct 717005 TAGTAGTTAATGTCTATGATCTTGTTCAGGTTCTTGACGATTACTTTGGTCACAT-ATGA 716947 Query 114419 -AGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGA 114477 || |||| | ||||| | || ||| |||| ||| | || ||||| || Sbjct 716946 CAGTTTTTTAAAGTCAAAGGTCCG---CTCAGGGGTGACGTACATGTTGAGAGCGATGGA 716890 Query 114478 CGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAA 114537 |||||||||||||| | |||||| | ||||| || | |||||| || || | Sbjct 716889 GGCCAGATTACACACCGCCACCTCATCGTGGCTGGTGTATTCAACAATTTCTGTGCAGAG 716830 Query 114538 ATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTT 114597 || | || |||||||||| |||| || || ||| |||| || || || || Sbjct 716829 GTTGCTGCATTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTT 716770 Query 114598 GTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACAT- 114656 ||| |||||||| || || ||||| || || ||||| | | ||| || | ||| || | Sbjct 716769 GTACAGCATGTACGGTGTACCCGTTTCTGTCTGGGATTCAATAATGGCATACCACACCTG 716710 Query 114657 CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTT 114716 | | | || || | || ||| | | |||||||| ||| || || |||||||| | Sbjct 716709 CTGAGCCTTCACCACTCGC-TTGACCCTCCCCTCCTTCTCATATTTGGTGTAGAGCTGCT 716651 Query 114717 CAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACC 114776 ||||||| || ||| | || ||||| || || | || || | ||||||| Sbjct 716650 CAAACTCCTCCCCCCAGCATTCGTCCAGCCCGGGGCACTCGTTCGGACACATCAGAGACC 716591 Query 114777 A---TTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGA 114833 | ||| | |||| || | ||||||||| | ||| |||||||| || || | | Sbjct 716590 AGTCTTGGTTGCTCTCC---ACTCTCTTCATGAACAAGTCAGGGATCCACAGTGCATAAA 716534 Query 114834 AGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCC 114892 | ||||| | | | ||| | | | ||| || || || ||||| ||||| Sbjct 716533 AAAGATCTCTGGCCCTTTGCTCATCCTTACCCGTG-TTCTTCTTCAGCTCCAGGAAGTCA 716475 Query 114893 ATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTACGACGACC 114948 | | || |||||| || |||||||||| |||| | || || | | || Sbjct 716474 AACACGTCAAAGTGCCATGGCTCCAGGTACATGGCGAAGGCTCCCGGTCTCTTGTTG-CC 716416 Query 114949 AGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATC 115008 |||||| ||||| | ||| ||| || | || | ||||| || | | ||||| Sbjct 716415 GCCCTGGTCGACATAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACCAGACCATT 716356 Query 115009 AGATTGGCCATTTGT-CCCCCGAATACGAGACTTATTGGCTCTGA--CATCATGGATGTG 115065 ||| | ||| ||||| || ||| | | || | ||||| || | || Sbjct 716355 AGAGTTGCCGTTTGTGCCAGCGATGTAGCTCCCCGTT-GATCTGATGCAGC--TGACCGC 716299 Query 115066 CATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGAT 115125 || ||| || || || ||| | || ||||| | || || | | | || || | || || Sbjct 716298 CACACCGATTCCTCCAGCCGATTTGGAGATGAGGGCACAATGCTTCAGCGTGTCATAAAT 716239 Query 115126 CCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGG 115185 || || || |||| |||| | || | ||||||||||| |||| |||||||| Sbjct 716238 GCCTTCAATGCTGTCATCCTTCATGGCAAGCAGGAAGCAGCTAGACAGCTGTGGCCTGTT 716179 Query 115186 TGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAAC 115225 || || ||||||||||| || || | |||||| ||||| Sbjct 716178 GGTTCCTGCGTTGAAGAGTGTAGGAGAAGCGTGGGTGAAC 716139 >seq65 Length=22759279 Score = 96.9 bits (106), Expect = 4e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 ||||||| | | |||||| || || |||||| ||| || ||||| || || | ||| | Sbjct 20259748 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTTT 20259689 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACG 126185 ||| |||||| |||||| || ||||| |||||||||||||||||||| ||||| | Sbjct 20259688 TCAGCCAGAAGATCGCAGCGAACGAACCAGAGAAGAAGATTCCCTCCACTGCGGCGAAGG 20259629 Query 126186 CAAAGAGACGCTC 126198 | | | |||||| Sbjct 20259628 CCACCACACGCTC 20259616 Score = 96.9 bits (106), Expect = 4e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 ||||||| | | |||||| || || |||||| ||| || ||||| || || | ||| | Sbjct 20277584 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTTT 20277643 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACG 126185 ||| |||||| |||||| || ||||| |||||||||||||||||||| ||||| | Sbjct 20277644 TCAGCCAGAAGATCGCAGCGAACGAACCAGAGAAGAAGATTCCCTCCACTGCGGCGAAGG 20277703 Query 126186 CAAAGAGACGCTC 126198 | | | |||||| Sbjct 20277704 CCACCACACGCTC 20277716 >seq119 Length=8001379 Score = 86.0 bits (94), Expect = 7e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| || | ||||| | ||||| | | |||||||| |||| ||| ||||| ||||| Sbjct 7004604 TAGATGTTACTGGTGTACGCCTCAATGGATTCATTGTTGCCCAGGATCTGGGCAGTGGAA 7004545 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 114033 |||||||||||||| |||| ||| || ||||| Sbjct 7004544 GCTGTGGGCATGGGGGCCAAGAGCAGACTGTT 7004513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597350732702720