Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq136 168 7e-37 seq119 86.0 6e-12 >seq136 Length=1264375 Score = 168 bits (186), Expect = 7e-37 Identities = 970/1540 (63%), Gaps = 41/1540 (3%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | | ||||| |||||| ||||||||| ||||||||| | ||||| |||| Sbjct 715975 TACAACTTCTTTGGCTTCAAGACTCTGGAGCGGTCGTACCTGTTGAAGATCACCGGCAAA 716034 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || | ||||| ||||| || |||| ||| | || | |||| || ||| || Sbjct 716035 GTGGCTGAGCGTCCGCAGCACATGCTCATGAGAGTGTCTGTCGGCATCCACAAAACTGAT 716094 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAG-----ACATGCGG---GACAAGAGGTATACCA 93889 || ||| ||| | | || ||| || | | | || | | ||| ||| Sbjct 716095 AT--CGA------TGCAGCCATTGAGACCTACAACCTTCTGTCAGAGAGGTGGTTCACCC 716146 Query 93890 TGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCC 93949 || | || || || |||||||| || ||| ||||||| ||||| || |||| Sbjct 716147 ACGCTTCTCCTACACTCTTCAACGCAGGAACCAACAGGCCACAGCTGTCTAGCTGCTTCC 716206 Query 93950 TGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGA 94009 || | | | |||| ||| ||| || |||| |||| || ||| | ||||| Sbjct 716207 TGCTTGCCATGAAGGATGACAGCATTGAAGGCATTTATGACACGCTGAAGCATTGTGCCC 716266 Query 94010 CCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTT 94069 |||||| |||| || || |||||||| | ||| | | | | | | ||| Sbjct 716267 TCATCTCCAAATCGGCTGGAGGAATCGGTGTGGCGGTCAGCTGCATCAGATCAACGGGGA 716326 Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129 ||||||| || || || |||| ||| || || || ||||| ||||| | || | || Sbjct 716327 GCTACATCGCTGGCACAAACGGCAACTCTAATGGTCTGGTCCCCATGCTGAGAGTTTACA 716386 Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189 ||||| ||||||| || || |||||||| || | ||| ||| | ||||| | | Sbjct 716387 ACAACACGGCGCGTTATGTCGACCAGGGCGGCAACAAGAGACCGGGAGCCTTCGCCATGT 716446 Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249 | || ||||| |||||| |||||| | ||| | || ||| |||||| || | Sbjct 716447 ACCTGGAGCCATGGCACTTTGACGTGTTTGACTTCCTGGAGCTGAAGAAGAACACGGGTA 716506 Query 94250 ACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309 | ||| | | ||||||||||| || || || || || ||| | || ||| | || |||| Sbjct 716507 AGGATGAGCAAAGGGCCAGAGATCTTTTTTATGCACTGTGGATCCCTGACTTGTTCATGA 716566 Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369 | | || |||| ||| | |||| ||| | ||||| || || || ||||| ||| Sbjct 716567 AGAGAGTGGAGAGCAACCAAGACTGGTCTCTGATGTGTCCGAACGAGTGCCCCGGGCTGG 716626 Query 94370 CCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGG 94429 ||| || || | ||||| | | || | || || | |||| | || Sbjct 716627 ACGAATGCTGGGGGGAGGAGTTTGAGCAGCTCTACACCAAATATGAGAAGGAGGGGAGGG 716686 Query 94430 CCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 || | || || | ||| | || ||||| || || | || ||| || | Sbjct 716687 TCAAGCGAGTGGTGAAGGCTCAGCAGGTGTGGTATGCCATTATTGAATCCCAGACAGAAA 716746 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 ||||||| || ||||| ||| ||| ||| | |||| ||| |||||||||| | | Sbjct 716747 CGGGTACACCGTACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAATC 716806 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609 | || ||||| || || || ||||| || ||||| || || || | || | Sbjct 716807 TGGGCACCATCAAATGCAGCAACCTCTGCACAGAAATTGTTGAATACACCAGCCACGATG 716866 Query 94610 AGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACA 94669 || | || |||||||| |||| ||||||| || || || | || || | ||| Sbjct 716867 AGGTGGCGGTGTGTAATCTGGCCTCCATC--GCTCTCAACAT--GTACGTCACCCCTGAG 716922 Query 94670 CGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAG-GATGGTCTTG 94728 || || ||| | || | | ||| | | | ||| || ||| | Sbjct 716923 CG--GAC--CTTTG-----ACTTTAAAAAACTGTCATATGTGACCAAAGTAATCGTCAAG 716973 Query 94729 AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAAC 94788 |||||||||| | | || |||| |||| ||| || || || || |||| || ||| Sbjct 716974 AACCTGAACAAGATCATAGACATTAACTACTATCCAGTGGTTGAAGCCGAGAGGTCCAAC 717033 Query 94789 CTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATG 94848 | || ||||| || || ||||| || |||||||| || || || | | ||||| Sbjct 717034 AAGCGCCACCGGCCAATAGGAATCGGTGTTCAGGGTTTGGCTGATGCCTTCATCCTGATG 717093 Query 94849 CGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATT 94908 |||| |||| || ||| || | | || | |||| || || | ||| Sbjct 717094 CGTCACCCCTTTGAAAGCCCCGAGGCTCAGCTGCTCAACATCCACATCTTTGAGACCATC 717153 Query 94909 TATTACGGGGCCAT-GAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGA 94967 || |||| ||| | || ||| | | | | ||||| | || ||| || |||| Sbjct 717154 TACTACGCCGCCCTGGAGGCAAGCTG-CGAGCTGGCC---GCCGAGCTCGGCCCCTACGA 717209 Query 94968 ATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAA 95027 ||| || || || | |||||| | |||| |||| | |||| || Sbjct 717210 GACGTATGAAGGCTCTCCTGTCAGCAAGGGCACCCTCCAGTACGACATGTGGGAGAAGAC 717269 Query 95028 GCCCTCGGGTCTGTACGACTGGGAAGCT-CT--ACGCGCTGATGTTATCAAACACGGTGT 95084 |||| | | |||| ||||| ||||||| || | | | || | ||| ||||| || Sbjct 717270 GCCCACTGACCTGTGCGACT-GGAAGCTGCTGAAGGAGAAGA--TCGCCAAGCACGGCGT 717326 Query 95085 GAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAA 95144 || ||| ||||| ||||||| |||||||| |||||||| || |||||||| ||||| Sbjct 717327 GAGGAACAGCCTGCTGCTGGCCCCGATGCCCACAGCCTCCACCGCCCAGATCCTGGGCAA 717386 Query 95145 CAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGA 95204 ||||||||| | || ||| ||| |||| | |||| | | |||| ||| |||| || Sbjct 717387 CAACGAGTCTATTGAGGCCTACACAAGCAACATCTACACCCGCAGGGTCCTCTCCGGAGA 717446 Query 95205 ATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACG 95244 || | || |||| || || || |||||||||| Sbjct 717447 GTTTCAGATCGTCAATCCTCATCTGCTCAAGGACCTGACG 717486 Score = 89.7 bits (98), Expect = 5e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 93331 GTCATGTTCGACAAGATCACTACCAGGGTGCGCAAACTTTGCGAGGGTCTGGACTCTGAC 93390 ||||||||||| || ||||| | | | | || |||||| | || ||| |||||||| Sbjct 715585 GTCATGTTCGATAAAATCACCTCTCGCATCCAGAAGCTTTGCTATGGACTGAACTCTGAC 715644 Query 93391 TTCGTGGATCCCGTCGAGGTCACCATGAGAGTGAATCAGGGAATATATGCCGGGGTCACA 93450 || ||||| || | | | ||||||||| |||| |||||| | || ||| ||||| Sbjct 715645 TTTGTGGACCCGGCCCAAATCACCATGAAGGTGATTCAGGGTTTGTACAGCGGAGTCACC 715704 Query 93451 ACTGTCGAGCTCGATCTTCTGGCCGCGGAGACTTGTGCCTTCATGAGTACGAATCACCCG 93510 || || |||||||| ||||| || |||| ||| | | || || ||||| Sbjct 715705 ACCGTGGAGCTCGACACGCTGGCAGCTGAGATCGCCGCCACTCTCACAACCAAACACCCC 715764 Query 93511 GACTACTCCATTTTGGCTGCTCGAATC 93537 |||||| |||| | ||||| || ||| Sbjct 715765 GACTACGCCATCCTCGCTGCACGGATC 715791 >seq119 Length=8001379 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 95067 TGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCAC 95126 |||| ||| || ||||||| ||| ||||| |||||||||||||||| || ||||| Sbjct 7004491 TGTTTTCAGGCATGGTGTGAGGAACAGTCTGCTCTTGGCCCCCATGCCCACAGCTTCCAC 7004550 Query 95127 GGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAG 95186 || |||||||| |||||||| || || | || | | |||| ||| | |||| | | Sbjct 7004551 TGCCCAGATCCTGGGCAACAATGAATCCATTGAGGCGTACACCAGTAACATCTACACCCG 7004610 Query 95187 GCGGGTGCTCGCCGGGGAATTCCCCGTCATCA 95218 |||||||| | || || || | |||| || Sbjct 7004611 CAGGGTGCTCTCAGGAGAGTTTCAGGTCAGCA 7004642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494720825328640