Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07-
05] 384 sequences; 639,269,536 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq81 86.0 4e-12
>seq81
Length=8687835
Score = 86.0 bits (94), Expect = 4e-12
Identities = 142/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
||| |||||||| ||||| || |||||||| || || | | | ||||| | ||
Sbjct 2939472 ATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTG 2939413
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
||||| || | |||| | ||| ||||| ||||| ||||||||||| || ||
Sbjct 2939412 CTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTT 2939353
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
| || ||| | || || || ||||| ||| || || | ||| ||||| ||||| ||
Sbjct 2939352 GGCCTTGACATTCTCAATGGTGTCGCTGGGTTCAACCTCAAGGGTGATGGTCTTACCAGT 2939293
Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177
|| || || || || |||||||||
Sbjct 2939292 GAGGGTCTTGACGAAGATTTGCATA 2939268
Score = 82.4 bits (90), Expect = 5e-11
Identities = 141/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
||| |||||||| ||||| || |||||||| || ||| | | | ||||| | ||
Sbjct 2926851 ATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCTGAGAGGGTGCGGCCATCTTCCAGCTG 2926792
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
||||| || | |||| | ||| ||||| ||||| ||||||||||| || ||
Sbjct 2926791 CTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTT 2926732
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
| || || | || || || ||||| || || || | ||| ||||| ||||| ||
Sbjct 2926731 GGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTACCAGT 2926672
Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177
|| || || ||||| || ||||||
Sbjct 2926671 GAGGGTCTTGACAAAGATCTGCATA 2926647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357390327405440
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |