Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq136 149 6e-31 seq119 86.0 6e-12 >seq136 Length=1264375 Score = 149 bits (164), Expect = 6e-31 Identities = 494/755 (65%), Gaps = 24/755 (3%) Strand=Plus/Minus Query 146044 AGGGCCTTGATGAGATACTGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGA 146103 ||| |||||| |||| | ||||| | ||||||||| |||| ||| || | | Sbjct 717482 AGGTCCTTGAGCAGATGAGGATTGACGATCTGAAACTCTCCGGAGAGGACCCTGCGGGTG 717423 Query 146104 TACACGTTGCTGGTGAACGGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTA 146163 || | |||||| ||| | | ||| | ||||||||||| || || ||||| || || | Sbjct 717422 TAGATGTTGCTTGTGTAGGCCTCAATAGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 717363 Query 146164 GCGGTAGGCATGTACGCCACCAGCAAAGAGTTTCTCACGCCGTGTCTTTGA-ATCTTTTC 146222 || || ||||| |||| ||||| ||| ||||||||||| ||| | ||||| || Sbjct 717362 GCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTG-CTTGGCGATCTTCTC 717304 Query 146223 CC---GTAGTTTGGACCAATTCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTA 146279 | | || || ||| | |||| | || ||||| | | | ||||||| Sbjct 717303 CTTCAGCAGCTT---CCAGTCGCACA---GGTCAGTGGGCGTCTTCTCCCACATGTCGTA 717250 Query 146280 ATGCATAGTGCC---GCGGAACAGGGGGCTATTCTCGTACGATTCATAAGGACCGTCGAT 146336 || | ||||| || || |||| | ||| |||| || || || ||| | | Sbjct 717249 CTGGAGGGTGCCCTTGCTGA-CAGGAGAGCCTTCA--TACGTCTCGTAGGGGCCGA-GCT 717194 Query 146337 CTT-GGCCAGTTCGCAGCTAGCTTCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGT 146395 | |||||| |||||||| || ||||| || | |||| |||||||| ||| | Sbjct 717193 CGGCGGCCAGCTCGCAGCTTGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATGTGGA 717134 Query 146396 AGTTGACGCTCCTG-GCCTCCTCGCTGTCGTAGGGGATATCGAGAAGCACAAAGGCGTCG 146454 ||||| || ||| ||||| ||| || ||||| | | || | ||||| || Sbjct 717133 TGTTGA-GCAGCTGAGCCTCGGGGCTTTCAAAGGGGTGACGCATCAGGATGAAGGCATCA 717075 Query 146455 GCGAGACCCTGTATCCCGACACCAACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCCC 146514 || | |||||| | |||| || | || ||||| |||||| || | || | Sbjct 717074 GCCAAACCCTGAACACCGATTCCTATTGGCCGGTGGCGCTTGTTGGACCTCTCGGCTTCA 717015 Query 146515 GCAGTGGGATAGTGGTTGCTGTCGATGATCTTGTTGAGATTACGCACGACAATTTTCGTC 146574 | ||||||| ||| |||| ||||||||||| || || |||| | ||| ||| Sbjct 717014 ACCACTGGATAGTAGTTAATGTCTATGATCTTGTTCAGGTTCTTGACGATTACTTTGGTC 716955 Query 146575 AAACGATTCAGCAGGACATAGTCAAATGTTTTAGTTTTAACGTTGACGCACTTGTTGACG 146634 | | ||| | ||||||| || | | | ||||| || |||||| Sbjct 716954 ACATATGACAGTTTTTTAAAGTCAAAGGTCCGC---TCAGGGGTGACGTACATGTTGAGA 716898 Query 146635 GCGATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCG 146694 ||||| ||||||| ||||| || || ||| || | | | || | ||||| || Sbjct 716897 GCGATGGAGGCCAGATTACACACCGCCACCTCATCGTGGCTGGTGTATTCAACAATTTCT 716838 Query 146695 GCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAACTTGTTGCAG 146754 | ||||||||||||||| |||||| |||||| ||| | ||||| || | |||||||| Sbjct 716837 GTGCAGAGGTTGCTGCATTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAG 716778 Query 146755 GGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTC 146789 | ||| ||||| |||||||||||| || ||||| Sbjct 716777 GCGTCTTTGTACAGCATGTACGGTGTACCCGTTTC 716743 >seq119 Length=8001379 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 146680 TACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTA 146739 |||| ||| ||||| | ||| || || ||| | |||||| |||||||||| | ||||| Sbjct 7003612 TACTCCACTATCTCTGTGCATAGATTACTGGATTTGATGGTGCCCAAATTCTGCTGGTTG 7003553 Query 146740 CTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTC 146789 || | | ||||||| |||||||||||||||||| ||| || ||||| Sbjct 7003552 CTCTTCCTATTGCAGGCGTCCTTGTAGAGCATGTATGGTGTACCAGTTTC 7003503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475498517596160