Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq136 120 3e-22 seq119 86.0 6e-12 >seq136 Length=1264375 Score = 120 bits (132), Expect = 3e-22 Identities = 347/529 (66%), Gaps = 9/529 (2%) Strand=Plus/Plus Query 123235 CCATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGACCAGGGCGGCAAACGCAAA- 123293 |||||||| |||||||||| ||| | | ||| | ||||||||||||||||| | | Sbjct 716369 CCATGCTGAGAGTTTACAACAACACGGCGCGTTATGTCGACCAGGGCGGCAACAAGAGAC 716428 Query 123294 --GGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATT 123351 || || | || || || || || || |||||| |||| |||| || || | | Sbjct 716429 CGGGAGCCTTCGCCATGTACCTGGAGCCATGGCACTTTGACGTGTTTGACTTCCTGGAGC 716488 Query 123352 TAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGG 123411 | || |||| ||| ||| || | | ||| | ||| | || || || | ||| Sbjct 716489 TGAAGAAGAACACGGGTAAGGATGAGCAAAGGGCCAGAGATCTTTTTTATGCACTGTGGA 716548 Query 123412 TACCCGATTTGTTTATGCGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCG 123471 | || || ||||| ||| | || | | || | ||||| || |||||||| | Sbjct 716549 TCCCTGACTTGTTCATGAAGAGAGTGGAGAGCAACCAAGACTGGTCTCTGATGTGTCC-G 716607 Query 123472 ATCG-GTGTCCCGGCTTGAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAA 123530 | || ||| ||||| || ||| | || | ||||||| || | ||| | || Sbjct 716608 AACGAGTGCCCCGGGCTGGACGAATGCTGGGGGGAGGAGTTTGAGCAGCTCTACACCAAA 716667 Query 123531 TACGAGCGCGAAGGCAAA--CAGGTTAGTCAGGTTCCGGCACGTGATTTGTTCAAATTTA 123588 || ||| || || | || | ||| ||| ||| | | ||| | | Sbjct 716668 TATGAGAAGGAGGGGAGGGTCAAGCGAGT--GGTGAAGGCTCAGCAGGTGTGGTATGCCA 716725 Query 123589 TTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACA 123648 |||| ||| | || ||||| || || ||||||||||| ||||||||||||||||||| Sbjct 716726 TTATTGAATCCCAGACAGAAACGGGTACACCGTACATGCTGTACAAAGACGCCTGCAACA 716785 Query 123649 GGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTA 123708 |||| | ||| ||| || |||| || || ||||| || || || ||| | |||||| Sbjct 716786 GGAAGAGCAACCAGCAGAATCTGGGCACCATCAAATGCAGCAACCTCTGCACAGAAATTG 716845 Query 123709 TCGAATACAGCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGAT 123757 | ||||||| | |||| | ||||| ||||||||| |||| || || Sbjct 716846 TTGAATACACCAGCCACGATGAGGTGGCGGTGTGTAATCTGGCCTCCAT 716894 >seq119 Length=8001379 Score = 86.0 bits (94), Expect = 6e-12 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 123588 ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAAC 123647 || ||||| |||| ||||| || || || |||||||||||||| ||||||||||| Sbjct 7003485 ATCATCGAGTCACAGACAGAAACTGGTACACCATACATGCTCTACAAGGACGCCTGCAAT 7003544 Query 123648 AGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATT 123707 ||||| | ||| ||| || ||||| || || |||| |||||||| ||| | || || Sbjct 7003545 AGGAAGAGCAACCAGCAGAATTTGGGCACCATCAAATCCAGTAATCTATGCACAGAGATA 7003604 Query 123708 ATCGAATACA 123717 | || |||| Sbjct 7003605 GTGGAGTACA 7003614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452001030384640