Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq81 149 1e-30 seq166 143 6e-29 >seq81 Length=8687835 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||| ||||| || |||||||| |||| ||||||||||| || || | ||||| Sbjct 2926632 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATC 2926573 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| ||||| ||||| || | |||||| || || ||| ||||| || Sbjct 2926572 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTC 2926513 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||||| || | |||||| | | ||| || || | ||||| || Sbjct 2926512 CTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGTTCAACCTCAAGGGTGATGGT 2926453 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||| ||||| || || ||||| || || Sbjct 2926452 CTTACCAGTGAGGGTCTTGACAAATATCTG 2926423 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||| ||||| || |||||||| |||| ||||||||||| || || | ||||| Sbjct 2927088 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATC 2927029 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| ||||| ||||| || | |||||| || || ||| ||||| || Sbjct 2927028 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTC 2926969 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||||| || | |||||| | | || || |||| ||||| || Sbjct 2926968 CTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGT 2926909 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||| ||||| || || || || ||||| Sbjct 2926908 CTTACCAGTGAGGGTCTTGACGAAGATTTG 2926879 Score = 140 bits (154), Expect = 8e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||| ||||| || || || || |||| |||||||||| || || | ||||| Sbjct 2939709 CAGGACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAGTCAGACAGGGTGCGACCATC 2939650 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| ||||| ||||| || | ||||||||| || ||| ||||| || Sbjct 2939649 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 2939590 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||||| || | |||||| | | || || |||| ||||| || Sbjct 2939589 CTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGT 2939530 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||| ||||| || || || || ||||| Sbjct 2939529 CTTACCAGTGAGGGTCTTGACGAAGATTTG 2939500 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||| ||||| || || || || |||| ||||||||| | | || | ||||| Sbjct 2926860 CAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCTGAGAGGGTGCGGCCATC 2926801 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| ||||| ||||| || | ||||||||| || ||| ||||| || Sbjct 2926800 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 2926741 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||||| || | |||||| | | || || |||| ||||| || Sbjct 2926740 CTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGT 2926681 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||| ||||| || || ||||| || || Sbjct 2926680 CTTACCAGTGAGGGTCTTGACAAAGATCTG 2926651 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||| ||||| || || || || |||| ||||||||||| || || | ||||| Sbjct 2927544 CAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATC 2927485 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| ||||| ||||| || | ||||||||| || ||| ||||| || Sbjct 2927484 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 2927425 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||| || || | |||||| | | ||| || |||| ||||| || Sbjct 2927424 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGTTCAACCTCCAGGGTGATGGT 2927365 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||| ||||| || || || || || || Sbjct 2927364 CTTACCAGTGAGGGTCTTGACGAAGATCTG 2927335 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||| ||||| || || || || |||| ||||||||||| || || | ||||| Sbjct 2939481 CAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATC 2939422 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| ||||| ||||| || | ||||||||| || ||| ||||| || Sbjct 2939421 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 2939362 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||| || || | |||||| | | ||| || || | ||||| || Sbjct 2939361 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGTTCAACCTCAAGGGTGATGGT 2939302 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||| ||||| || || || || ||||| Sbjct 2939301 CTTACCAGTGAGGGTCTTGACGAAGATTTG 2939272 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||| ||||| || || || || |||| ||||||||||| || || | ||||| Sbjct 2925948 CAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATC 2925889 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| ||||| ||||| || | |||||| || || ||| ||||| || Sbjct 2925888 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTATC 2925829 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| || ||| ||| || || | ||| || | | || || ||||| ||||| || Sbjct 2925828 CTGGATTTTTGCCTTGACATTCTCAATGGTATCGCTGGGCTCAACCTCCAAGGTGATGGT 2925769 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| || |||||||| || || Sbjct 2925768 CTTGCCAGTGAGGGTCTTCACAAAGATCTG 2925739 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||| ||||| || || || || |||| |||||||||| | || | ||||| Sbjct 2927316 CAGGACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAGTCAGAGAGGGTGCGGCCATC 2927257 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| ||||| ||||| || | ||||||||| || ||| ||||| || Sbjct 2927256 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 2927197 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||||| || | |||||| | | || || || | ||||| || Sbjct 2927196 CTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGT 2927137 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||| ||||| || || ||||| || || Sbjct 2927136 CTTACCAGTGAGGGTCTTGACAAAGATCTG 2927107 Score = 122 bits (134), Expect = 2e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||| ||||| || || || || |||| ||||||||| | | || | ||||| Sbjct 2926404 CAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCTGAGAGGGTGCGGCCATC 2926345 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| ||||| ||||| || | ||||||||| || ||| ||||| || Sbjct 2926344 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 2926285 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||| || || | |||||| ||| || || || | ||||| || Sbjct 2926284 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTTGGCTCAACCTCAAGGGTGATGGT 2926225 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||| ||||| || || || || || || Sbjct 2926224 CTTACCAGTGAGGGTCTTGACGAAGATCTG 2926195 Score = 122 bits (134), Expect = 2e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||| ||||| || || || || |||| ||||||||||| | || | ||||| Sbjct 2939253 CAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATC 2939194 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| ||||| ||||| || | ||||||||| || ||| ||||| || Sbjct 2939193 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 2939134 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||| || || | |||||| ||| || || || | ||||| || Sbjct 2939133 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTTGGCTCAACCTCAAGGGTGATGGT 2939074 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| || || || || || || Sbjct 2939073 CTTGCCAGTGAGGGTCTTGACGAAGATCTG 2939044 Score = 109 bits (120), Expect = 1e-18 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||| ||||| || || || || |||| ||||||||| | | || | ||||| Sbjct 2926176 CAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCTGAGAGGGTGCGGCCATC 2926117 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| || || ||||| || | |||||| || || ||| ||||| || Sbjct 2926116 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTC 2926057 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||| || || | |||||| | | || || |||| ||||| || Sbjct 2926056 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGT 2925997 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| || || || || || || Sbjct 2925996 CTTGCCAGTGAGGGTCTTGACGAAGATCTG 2925967 >seq166 Length=972737 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| ||||| || |||||||| |||| ||||||||||| | || | |||||| Sbjct 969208 AGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCT 969149 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || || ||||| || | ||||||||||||| || ||||| ||| Sbjct 969148 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCCGGAGGGATGCCTTCCTTATCC 969089 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || ||| || ||| | |||||| | | || || ||||| ||||| ||| Sbjct 969088 TGGATTTTGGCCTTGACATTTTCAATGGTGTCACTGGGCTCAACCTCCAAAGTGATGGTC 969029 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || |||||||| || || Sbjct 969028 TTACCAGTGAGGGTCTTCACAAAGATCTG 969000 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| ||||| || |||||||| |||| ||||||||| | | || | |||||| Sbjct 969436 AGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 969377 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||||||||||||||| ||| || |||||| ||| Sbjct 969376 TCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCTTTGTCC 969317 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || ||| || || | |||||| | | || || |||| ||||| ||| Sbjct 969316 TGGATTTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTC 969257 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || ||||| || || || Sbjct 969256 TTGCCAGTGAGGGTCTTCACGAAGATCTG 969228 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| ||||| || |||||||| |||| ||||||||| | | || | || ||| Sbjct 969664 AGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCT 969605 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || || |||||||||||||||||||| || || ||||| ||| Sbjct 969604 TCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTTATCC 969545 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| || || || | |||||| | | ||| || |||| ||||| ||| Sbjct 969544 TGGATCTTAGCTTTGACATTCTCAATGGTGTCGCTGGGTTCGACCTCCAGAGTGATGGTC 969485 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || ||||| || || || Sbjct 969484 TTGCCAGTGAGGGTCTTCACGAAGATCTG 969456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178915799705728