Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq211 109 2e-18 seq81 93.3 2e-13 >seq211 Length=7687989 Score = 109 bits (120), Expect = 2e-18 Identities = 350/538 (65%), Gaps = 4/538 (1%) Strand=Plus/Plus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 ||||| || ||||| || ||||||| ||| || || || ||| ||| |||| || || Sbjct 4100951 ATTGGCATCGATCTGGGCACCACCTATTCCTGCGTTGGGATTTTCCAGCATGGCAAAGTG 4101010 Query 450977 GAAATTATAGCAAATGACCAAGG-ATCACGAACTACTCCTTCATGGGTAAGTTTTACGGA 451035 || || || || || ||||| || | || || | ||||| | || |||||| || Sbjct 4101011 GAGATCATTGCCAACGACCAGGGCAACAGGACC-ACTCCCAGCTATGTGGCTTTTACTGA 4101069 Query 451036 TTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATGCCAAAAACA 451094 |||| || || | || | ||||| || | | | ||| || ||| |||| Sbjct 4101070 CACAGAGAGGCTCATTGGAGATGCTGCCAAGAACCA-GGTCGCCATGAACCCCACCAACA 4101128 Query 451095 CAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAG 451154 |||| | |||||| ||||| | || || | | || | | || | ||| || | Sbjct 4101129 CAGTCTTTGATGCCAAACGACTCATCGGTAGAAAGTTTAACGACACCATTGTCCAGTCTG 4101188 Query 451155 AGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAA 451214 | | ||| ||| ||| | || | || | || ||||||||| | |||| || Sbjct 4101189 ACATGAAACTCTGGCCTTTCAAGGTGATCAACGATAACGGAAAGCCCAAAGTTCAGGTGG 4101248 Query 451215 ATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTA 451274 | ||||||||||| || || | || ||||| ||||| || || ||||| | || Sbjct 4101249 AGTATAAAGGTGAGACCAAGGCCTTCTACCCTGAGGAAATCTCGTCCATGGTCTTGGTTA 4101308 Query 451275 AAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTG 451334 ||||||| || | ||| || ||| | || || | ||||||| || || | Sbjct 4101309 AAATGAAGGAGATAGCCGAGGCCTATCTGGGACAGAAGGTGTCAAATGCAGTCATCACAG 4101368 Query 451335 TTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTG 451394 | || |||||||||||||| | || ||||||| || || || |||||| || ||| Sbjct 4101369 TGCCAGCTTATTTCAATGACTCTCAGAGGCAAGCCACCAAGGACGCAGGAGTAATCTCTG 4101428 Query 451395 GTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACT 451452 | | |||||| | | || || || || || |||||||| || | || ||||| || Sbjct 4101429 GACTGAATGTTTTGAGGATCATCAACGAGCCCACAGCAGCAGCCATCGCCTATGGCCT 4101486 >seq81 Length=8687835 Score = 93.3 bits (102), Expect = 2e-13 Identities = 101/132 (77%), Gaps = 4/132 (3%) Strand=Plus/Plus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| || || || || || || ||||| ||||| | ||||| |||||||| || |||| Sbjct 7946667 ATGCTGTTATCACAGTACCTGCATATTTTAATGACTCTCAACGTCAAGCAACCAAGGATG 7946726 Query 451380 CAGGA--CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGC 451437 | ||| ||||| ||||| ||||||| | |||| ||||||||||| || ||||| || Sbjct 7946727 CTGGAACCATAT--CTGGTCTAAATGTGTTGAGAATCATTAATGAACCCACTGCAGCAGC 7946784 Query 451438 TCTAGCATATGG 451449 | | || ||||| Sbjct 7946785 TATCGCTTATGG 7946796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975708679465472